RNA–Protein interactions for RNA: ENST00000448243.5

CCDC18-206, Transcript of coiled-coil domain containing 18, humanhuman

TSL 2

Gene CCDC18, Length 496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-206ENST00000448243 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
CCDC18-206ENST00000448243 LRP2BPQ9P2M1 347 aa16.68■□□□□ 0.26
CCDC18-206ENST00000448243 HERC5Q9UII4 1024 aaKnown RBP16.68■□□□□ 0.26
CCDC18-206ENST00000448243 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
CCDC18-206ENST00000448243 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
CCDC18-206ENST00000448243 BAG3O95817 575 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
CCDC18-206ENST00000448243 PLCG2P16885 1265 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 UBE2Q1Q7Z7E8 422 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 TEX11Q8IYF3 940 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 ANKRD13CQ8N6S4 541 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
CCDC18-206ENST00000448243 NSUN4Q96CB9 384 aaKnown RBP16.67■□□□□ 0.26
CCDC18-206ENST00000448243 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
CCDC18-206ENST00000448243 ELNP15502 786 aa16.66■□□□□ 0.26
CCDC18-206ENST00000448243 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
CCDC18-206ENST00000448243 SPP2Q13103 211 aa16.66■□□□□ 0.26
CCDC18-206ENST00000448243 DOCK1Q14185 1865 aa16.66■□□□□ 0.26
CCDC18-206ENST00000448243 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
CCDC18-206ENST00000448243 EVI5O60447 810 aa16.65■□□□□ 0.26
CCDC18-206ENST00000448243 CAP2P40123 477 aa16.65■□□□□ 0.26
CCDC18-206ENST00000448243 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
CCDC18-206ENST00000448243 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
CCDC18-206ENST00000448243 PI4KBQ9UBF8 816 aa16.65■□□□□ 0.26
CCDC18-206ENST00000448243 IGSF3O75054 1194 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 CCDC158Q5M9N0 1113 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
CCDC18-206ENST00000448243 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
CCDC18-206ENST00000448243 MGAMO43451 1857 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 HMGCRP04035 888 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 ASNSP08243 561 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 HMGCS2P54868 508 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 PI16Q6UXB8 463 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 ZNF384Q8TF68 577 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
CCDC18-206ENST00000448243 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
CCDC18-206ENST00000448243 A0A1W2PPC1 479 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
CCDC18-206ENST00000448243 SLURP2P0DP57 97 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 TRIM27P14373 513 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
CCDC18-206ENST00000448243 ASCC2Q9H1I8 757 aaPredicted RBP16.62■□□□□ 0.25
CCDC18-206ENST00000448243 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
CCDC18-206ENST00000448243 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
CCDC18-206ENST00000448243 MCAMP43121 646 aa16.61■□□□□ 0.25
CCDC18-206ENST00000448243 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
CCDC18-206ENST00000448243 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
CCDC18-206ENST00000448243 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
CCDC18-206ENST00000448243 WDR18Q9BV38 432 aa16.61■□□□□ 0.25
CCDC18-206ENST00000448243 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
CCDC18-206ENST00000448243 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC18-206ENST00000448243 PTPRFP10586 1907 aa16.6■□□□□ 0.25
CCDC18-206ENST00000448243 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
CCDC18-206ENST00000448243 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
CCDC18-206ENST00000448243 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
CCDC18-206ENST00000448243 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
CCDC18-206ENST00000448243 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC18-206ENST00000448243 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 BACE1P56817 501 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 PPP4CP60510 307 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 MTMR2Q13614 643 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 GTF3C2Q8WUA4 911 aaPredicted RBP16.59■□□□□ 0.25
CCDC18-206ENST00000448243 SOCS4Q8WXH5 440 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 CLUAP1Q96AJ1 413 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 MORF4L1Q9UBU8 362 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 RPTORQ8N122 1335 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 PHIPQ8WWQ0 1821 aa16.59■□□□□ 0.25
CCDC18-206ENST00000448243 A0A0C4DFX4 3053 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CCDC18-206ENST00000448243 PDE3AQ14432 1141 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 TNNI3KQ59H18 835 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 TRMT44Q8IYL2 757 aaKnown RBP16.58■□□□□ 0.24
CCDC18-206ENST00000448243 GPRC5AQ8NFJ5 357 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 TGFBRAP1Q8WUH2 860 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 PAWRQ96IZ0 340 aaKnown RBP16.58■□□□□ 0.24
CCDC18-206ENST00000448243 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
CCDC18-206ENST00000448243 FPGT-TNNI3KV9GXZ4 949 aa16.58■□□□□ 0.24
CCDC18-206ENST00000448243 FLT1P17948 1338 aa16.57■□□□□ 0.24
CCDC18-206ENST00000448243 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
CCDC18-206ENST00000448243 ZKSCAN2Q63HK3 967 aa16.57■□□□□ 0.24
CCDC18-206ENST00000448243 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
CCDC18-206ENST00000448243 NUDT12Q9BQG2 462 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms