RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 IDI2Q9BXS1 227 aa13.87□□□□□ -0.19
LINC00408-201ENST00000447784 ZBTB48P10074 688 aaPredicted RBP13.86□□□□□ -0.19
LINC00408-201ENST00000447784 INHBEP58166 350 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 MAPKAPK5Q8IW41 473 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 RNF186Q9NXI6 227 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 RAD50Q92878 1312 aa13.86□□□□□ -0.19
LINC00408-201ENST00000447784 ECM29Q5VYK3 1845 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 PATL2C9JE40 543 aaKnown RBP13.85□□□□□ -0.19
LINC00408-201ENST00000447784 PRKAB2O43741 272 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
LINC00408-201ENST00000447784 WDHD1O75717 1129 aaPredicted RBP13.85□□□□□ -0.19
LINC00408-201ENST00000447784 TDO2P48775 406 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 NFIAQ12857 509 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 DCAF15Q66K64 600 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00408-201ENST00000447784 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
LINC00408-201ENST00000447784 MANSC4A6NHS7 340 aaPredicted RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 CAPN15O75808 1086 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 POLR3DP05423 398 aaPredicted RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 WNK4Q96J92 1243 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 ESYT1Q9BSJ8 1104 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 DHX36Q9H2U1 1008 aaKnown RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 SAP30BPQ9UHR5 308 aaKnown RBP13.84□□□□□ -0.19
LINC00408-201ENST00000447784 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
LINC00408-201ENST00000447784 SGSM2O43147 1006 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 TRPA1O75762 1119 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 TTC6Q86TZ1 520 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 NAPBQ9H115 298 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 CSADQ9Y600 493 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 FLT1P17948 1338 aa13.83□□□□□ -0.2
LINC00408-201ENST00000447784 GSG1L2A8MUP6 293 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
LINC00408-201ENST00000447784 VGLL4Q14135 290 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
LINC00408-201ENST00000447784 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 ZNF341Q9BYN7 854 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 DCP1AQ9NPI6 582 aaPredicted RBP13.82□□□□□ -0.2
LINC00408-201ENST00000447784 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
LINC00408-201ENST00000447784 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 ZNF112Q9UJU3 913 aa13.82□□□□□ -0.2
LINC00408-201ENST00000447784 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 REC8O95072 547 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 ALDH1A1P00352 501 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 HSPD1P10809 573 aaKnown RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 GJA5P36382 358 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 NOM1Q5C9Z4 860 aaKnown RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 ZFPM1Q8IX07 1006 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 CRACR2BQ8N4Y2 399 aaPredicted RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 OPTNQ96CV9 577 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 WRNIP1Q96S55 665 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 ELP3Q9H9T3 547 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
LINC00408-201ENST00000447784 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
LINC00408-201ENST00000447784 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 USP17L21D6R901 530 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 ERO1BQ86YB8 467 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
LINC00408-201ENST00000447784 DSCC1Q9BVC3 393 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 SNCAIPQ9Y6H5 919 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
LINC00408-201ENST00000447784 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
LINC00408-201ENST00000447784 ALX1Q15699 326 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 SH3BP5LQ7L8J4 393 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
LINC00408-201ENST00000447784 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 FGAP02671 866 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 GTF2A2P52657 109 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
LINC00408-201ENST00000447784 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 NOL9Q5SY16 702 aaKnown RBP13.78□□□□□ -0.2
LINC00408-201ENST00000447784 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
LINC00408-201ENST00000447784 ZKSCAN4Q969J2 545 aaPredicted RBP13.78□□□□□ -0.2
LINC00408-201ENST00000447784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms