RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 GCLCP48506 637 aaPredicted RBP30.1■■■□□ 2.41
PMS1-214ENST00000446877 TRMT2AQ8IZ69 625 aaKnown RBP30.1■■■□□ 2.41
PMS1-214ENST00000446877 TBC1D2Q9BYX2 928 aa30.1■■■□□ 2.41
PMS1-214ENST00000446877 FAM196BA6NMK8 535 aa30.09■■■□□ 2.41
PMS1-214ENST00000446877 RAI14Q9P0K7 980 aa30.09■■■□□ 2.41
PMS1-214ENST00000446877 HMG20BQ9P0W2 317 aa30.09■■■□□ 2.41
PMS1-214ENST00000446877 MYH2Q9UKX2 1941 aa30.08■■■□□ 2.41
PMS1-214ENST00000446877 SPATA5Q8NB90 893 aa30.08■■■□□ 2.41
PMS1-214ENST00000446877 DOCK2Q92608 1830 aa30.08■■■□□ 2.41
PMS1-214ENST00000446877 A0A1W2PPC1 479 aa30.07■■■□□ 2.4
PMS1-214ENST00000446877 NECAB2Q7Z6G3 386 aa30.07■■■□□ 2.4
PMS1-214ENST00000446877 NSUN4Q96CB9 384 aaKnown RBP30.07■■■□□ 2.4
PMS1-214ENST00000446877 PAWRQ96IZ0 340 aaKnown RBP30.07■■■□□ 2.4
PMS1-214ENST00000446877 CRISPLD2Q9H0B8 497 aa30.07■■■□□ 2.4
PMS1-214ENST00000446877 HMGCS2P54868 508 aa30.06■■■□□ 2.4
PMS1-214ENST00000446877 TBC1D9Q6ZT07 1266 aa30.06■■■□□ 2.4
PMS1-214ENST00000446877 ZNF384Q8TF68 577 aa30.06■■■□□ 2.4
PMS1-214ENST00000446877 USP17L5A8MUK1 530 aa30.05■■■□□ 2.4
PMS1-214ENST00000446877 CAP2P40123 477 aa30.05■■■□□ 2.4
PMS1-214ENST00000446877 MTX1Q13505 466 aa30.05■■■□□ 2.4
PMS1-214ENST00000446877 NOL10Q9BSC4 688 aaKnown RBP30.05■■■□□ 2.4
PMS1-214ENST00000446877 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.05■■■□□ 2.4
PMS1-214ENST00000446877 AS3MTQ9HBK9 375 aa30.05■■■□□ 2.4
PMS1-214ENST00000446877 HMGCRP04035 888 aa30.04■■■□□ 2.4
PMS1-214ENST00000446877 TEX11Q8IYF3 940 aa30.04■■■□□ 2.4
PMS1-214ENST00000446877 LRP2BPQ9P2M1 347 aa30.04■■■□□ 2.4
PMS1-214ENST00000446877 MGAMO43451 1857 aa30.04■■■□□ 2.4
PMS1-214ENST00000446877 PI16Q6UXB8 463 aa30.03■■■□□ 2.4
PMS1-214ENST00000446877 ARHGAP45Q92619 1136 aa30.03■■■□□ 2.4
PMS1-214ENST00000446877 ASCC2Q9H1I8 757 aaPredicted RBP30.03■■■□□ 2.4
PMS1-214ENST00000446877 STAP2Q9UGK3 403 aa30.03■■■□□ 2.4
PMS1-214ENST00000446877 HERC5Q9UII4 1024 aaKnown RBP30.03■■■□□ 2.4
PMS1-214ENST00000446877 G3BP1Q13283 466 aaKnown RBP eCLIP30.02■■■□□ 2.4
PMS1-214ENST00000446877 ANKLE1Q8NAG6 615 aa30.02■■■□□ 2.4
PMS1-214ENST00000446877 HMX1Q9NP08 348 aaPredicted RBP30.02■■■□□ 2.4
PMS1-214ENST00000446877 RARSP54136 660 aaKnown RBP30.01■■■□□ 2.39
PMS1-214ENST00000446877 PI4KBQ9UBF8 816 aa30.01■■■□□ 2.39
PMS1-214ENST00000446877 DOCK1Q14185 1865 aa30.01■■■□□ 2.39
PMS1-214ENST00000446877 UQCRFS1P1P0C7P4 283 aa30■■■□□ 2.39
PMS1-214ENST00000446877 ARID4AP29374 1257 aaPredicted RBP30■■■□□ 2.39
PMS1-214ENST00000446877 SH3D19Q5HYK7 790 aa30■■■□□ 2.39
PMS1-214ENST00000446877 GJD2Q9UKL4 321 aa30■■■□□ 2.39
PMS1-214ENST00000446877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30■■■□□ 2.39
PMS1-214ENST00000446877 COL2A1P02458 1487 aaPredicted RBP29.99■■■□□ 2.39
PMS1-214ENST00000446877 RPTORQ8N122 1335 aa29.99■■■□□ 2.39
PMS1-214ENST00000446877 BAG3O95817 575 aa29.99■■■□□ 2.39
PMS1-214ENST00000446877 IRX3P78415 501 aaPredicted RBP29.99■■■□□ 2.39
PMS1-214ENST00000446877 DIS3LQ8TF46 1054 aaKnown RBP29.99■■■□□ 2.39
PMS1-214ENST00000446877 DHX36Q9H2U1 1008 aaKnown RBP29.99■■■□□ 2.39
PMS1-214ENST00000446877 TMOD4Q9NZQ9 345 aa29.99■■■□□ 2.39
PMS1-214ENST00000446877 GNAI2P04899 355 aa29.98■■■□□ 2.39
PMS1-214ENST00000446877 RRP1BQ14684 758 aaKnown RBP29.98■■■□□ 2.39
PMS1-214ENST00000446877 SH3RF3Q8TEJ3 882 aaPredicted RBP29.98■■■□□ 2.39
PMS1-214ENST00000446877 NBPF3Q9H094 633 aa29.98■■■□□ 2.39
PMS1-214ENST00000446877 IPO8O15397 1037 aaKnown RBP29.97■■■□□ 2.39
PMS1-214ENST00000446877 WDR18Q9BV38 432 aa29.97■■■□□ 2.39
PMS1-214ENST00000446877 TRIM34Q9BYJ4 488 aa29.97■■■□□ 2.39
PMS1-214ENST00000446877 ASNSP08243 561 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 PLCG2P16885 1265 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 MCAMP43121 646 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 MTMR2Q13614 643 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 NAA16Q6N069 864 aaPredicted RBP29.96■■■□□ 2.39
PMS1-214ENST00000446877 C7orf61Q8IZ16 206 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 MORF4L1Q9UBU8 362 aa29.96■■■□□ 2.39
PMS1-214ENST00000446877 BACE1P56817 501 aa29.95■■■□□ 2.39
PMS1-214ENST00000446877 SLC17A8Q8NDX2 589 aa29.95■■■□□ 2.39
PMS1-214ENST00000446877 AATFQ9NY61 560 aaKnown RBP eCLIP29.95■■■□□ 2.39
PMS1-214ENST00000446877 PTPRFP10586 1907 aa29.94■■■□□ 2.38
PMS1-214ENST00000446877 PHIPQ8WWQ0 1821 aa29.94■■■□□ 2.38
PMS1-214ENST00000446877 TRIM32Q13049 653 aa29.94■■■□□ 2.38
PMS1-214ENST00000446877 FOXP4Q8IVH2 680 aaPredicted RBP29.94■■■□□ 2.38
PMS1-214ENST00000446877 CRACR2BQ8N4Y2 399 aaPredicted RBP29.94■■■□□ 2.38
PMS1-214ENST00000446877 GPRC5AQ8NFJ5 357 aa29.94■■■□□ 2.38
PMS1-214ENST00000446877 SOX1O00570 391 aaPredicted RBP29.93■■■□□ 2.38
PMS1-214ENST00000446877 CYP2B6P20813 491 aa29.93■■■□□ 2.38
PMS1-214ENST00000446877 HOXA7P31268 230 aaPredicted RBP29.93■■■□□ 2.38
PMS1-214ENST00000446877 P2RX7Q99572 595 aaKnown RBP29.93■■■□□ 2.38
PMS1-214ENST00000446877 C11orf49Q9H6J7 331 aa29.93■■■□□ 2.38
PMS1-214ENST00000446877 LAMA3Q16787 3333 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 C19orf81C9J6K1 198 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 CCDC158Q5M9N0 1113 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 TTC39AQ5SRH9 613 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 CCAR1Q8IX12 1150 aaKnown RBP29.92■■■□□ 2.38
PMS1-214ENST00000446877 TGFBRAP1Q8WUH2 860 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 LRCH3Q96II8 777 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 NUDT12Q9BQG2 462 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 SNRKQ9NRH2 765 aa29.92■■■□□ 2.38
PMS1-214ENST00000446877 ZMYND8Q9ULU4 1186 aaPredicted RBP29.92■■■□□ 2.38
PMS1-214ENST00000446877 BMP8BP34820 402 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 PPP4CP60510 307 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 MAPKAPK5Q8IW41 473 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 SOCS4Q8WXH5 440 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 TRIB2Q92519 343 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 GDF15Q99988 308 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 GINM1Q9NU53 330 aa29.91■■■□□ 2.38
PMS1-214ENST00000446877 PNMA6EA0A0J9YXQ4 647 aa29.9■■■□□ 2.38
PMS1-214ENST00000446877 USP17L10C9JJH3 530 aa29.9■■■□□ 2.38
PMS1-214ENST00000446877 HERVK_113P62684 666 aa29.9■■■□□ 2.38
PMS1-214ENST00000446877 PDE3AQ14432 1141 aa29.9■■■□□ 2.38
PMS1-214ENST00000446877 OGDHLQ9ULD0 1010 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms