RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
LIN54-203ENST00000446851 GH2P01242 217 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 GADL1Q6ZQY3 521 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 ZNF280AP59817 542 aaPredicted RBP12.18□□□□□ -0.46
LIN54-203ENST00000446851 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
LIN54-203ENST00000446851 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 CLMNQ96JQ2 1002 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
LIN54-203ENST00000446851 B4E1Z4 1266 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 COL4A5P29400 1685 aa12.18□□□□□ -0.46
LIN54-203ENST00000446851 TFAP4Q01664 338 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
LIN54-203ENST00000446851 OSBPL3Q9H4L5 887 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 ATP8A2Q9NTI2 1148 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 CPA1P15085 419 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 PPARAQ07869 468 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 SPP2Q13103 211 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
LIN54-203ENST00000446851 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 IL25Q9H293 177 aa12.17□□□□□ -0.46
LIN54-203ENST00000446851 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 RHBDL3P58872 404 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 PLS1Q14651 629 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
LIN54-203ENST00000446851 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
LIN54-203ENST00000446851 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 TMEM88BA6NKF7 163 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 DTNBO60941 627 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 ZNF341Q9BYN7 854 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
LIN54-203ENST00000446851 SGSM2O43147 1006 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 STK3Q13188 491 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 DEFB115Q30KQ5 88 aa12.16□□□□□ -0.46
LIN54-203ENST00000446851 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
LIN54-203ENST00000446851 MYCP01106 439 aaPredicted RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 CTR9Q6PD62 1173 aa12.15□□□□□ -0.46
LIN54-203ENST00000446851 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 SMCR8Q8TEV9 937 aaPredicted RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 SEPT2Q15019 361 aa12.15□□□□□ -0.46
LIN54-203ENST00000446851 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
LIN54-203ENST00000446851 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
LIN54-203ENST00000446851 ARPP21Q9UBL0 812 aaPredicted RBP12.15□□□□□ -0.46
LIN54-203ENST00000446851 CDK8P49336 464 aa12.15□□□□□ -0.47
LIN54-203ENST00000446851 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 RXRAP19793 462 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 FOSBP53539 338 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 RNF41Q9H4P4 317 aaPredicted RBP12.14□□□□□ -0.47
LIN54-203ENST00000446851 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 LAMB2P55268 1798 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
LIN54-203ENST00000446851 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 ESR2Q92731 530 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 NMT2O60551 498 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 ENTPD3O75355 529 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 SEC24BO95487 1268 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 C1QTNF8P60827 252 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 ICA1Q05084 483 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
LIN54-203ENST00000446851 CCDC88AQ3V6T2 1871 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 TCRBV5S4A2TA0A5A2 114 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
LIN54-203ENST00000446851 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
LIN54-203ENST00000446851 PPP4CP60510 307 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 GAKO14976 1311 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 NRXN2Q9P2S2 1712 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 NEK4P51957 841 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 HMGCS2P54868 508 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
LIN54-203ENST00000446851 AKR1B1P15121 316 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 VGLL4Q14135 290 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 TMEM67Q5HYA8 995 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
LIN54-203ENST00000446851 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 FAM83AQ86UY5 434 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 CPXCR1Q8N123 301 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
LIN54-203ENST00000446851 OPTNQ96CV9 577 aa12.12□□□□□ -0.47
LIN54-203ENST00000446851 CCDC69A6NI79 296 aa12.11□□□□□ -0.47
LIN54-203ENST00000446851 AOC2O75106 756 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms