RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 PXYLP1Q8TE99 480 aa18.67■□□□□ 0.58
NUCB1-205ENST00000443560 ZNF384Q8TF68 577 aa18.67■□□□□ 0.58
NUCB1-205ENST00000443560 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
NUCB1-205ENST00000443560 OSBPL5Q9H0X9 879 aaPredicted RBP18.67■□□□□ 0.58
NUCB1-205ENST00000443560 COL2A1P02458 1487 aaPredicted RBP18.66■□□□□ 0.58
NUCB1-205ENST00000443560 IRF5Q13568 498 aa18.66■□□□□ 0.58
NUCB1-205ENST00000443560 TREML2Q5T2D2 321 aa18.66■□□□□ 0.58
NUCB1-205ENST00000443560 PI16Q6UXB8 463 aa18.66■□□□□ 0.58
NUCB1-205ENST00000443560 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
NUCB1-205ENST00000443560 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
NUCB1-205ENST00000443560 ARID4AP29374 1257 aaPredicted RBP18.65■□□□□ 0.58
NUCB1-205ENST00000443560 SPP2Q13103 211 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 G3BP1Q13283 466 aaKnown RBP eCLIP18.65■□□□□ 0.58
NUCB1-205ENST00000443560 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 TEX11Q8IYF3 940 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 NOL10Q9BSC4 688 aaKnown RBP18.65■□□□□ 0.58
NUCB1-205ENST00000443560 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
NUCB1-205ENST00000443560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
NUCB1-205ENST00000443560 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
NUCB1-205ENST00000443560 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
NUCB1-205ENST00000443560 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
NUCB1-205ENST00000443560 GNAI2P04899 355 aa18.64■□□□□ 0.57
NUCB1-205ENST00000443560 CAPN2P17655 700 aa18.64■□□□□ 0.57
NUCB1-205ENST00000443560 PABPC4Q13310 644 aaKnown RBP eCLIP18.64■□□□□ 0.57
NUCB1-205ENST00000443560 ZNF280CQ8ND82 737 aa18.64■□□□□ 0.57
NUCB1-205ENST00000443560 LRP2BPQ9P2M1 347 aa18.64■□□□□ 0.57
NUCB1-205ENST00000443560 UQCRFS1P1P0C7P4 283 aa18.63■□□□□ 0.57
NUCB1-205ENST00000443560 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
NUCB1-205ENST00000443560 HMGCS2P54868 508 aa18.63■□□□□ 0.57
NUCB1-205ENST00000443560 SIPA1L1O43166 1804 aa18.63■□□□□ 0.57
NUCB1-205ENST00000443560 MYO5AQ9Y4I1 1855 aaKnown RBP18.63■□□□□ 0.57
NUCB1-205ENST00000443560 ALPK3Q96L96 1907 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
NUCB1-205ENST00000443560 CAP2P40123 477 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 MCAMP43121 646 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 AS3MTQ9HBK9 375 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 HERC5Q9UII4 1024 aaKnown RBP18.62■□□□□ 0.57
NUCB1-205ENST00000443560 FOCADQ5VW36 1801 aa18.62■□□□□ 0.57
NUCB1-205ENST00000443560 EVI5O60447 810 aa18.61■□□□□ 0.57
NUCB1-205ENST00000443560 TRIM27P14373 513 aa18.61■□□□□ 0.57
NUCB1-205ENST00000443560 SH3RF3Q8TEJ3 882 aaPredicted RBP18.61■□□□□ 0.57
NUCB1-205ENST00000443560 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
NUCB1-205ENST00000443560 PAK6Q9NQU5 681 aaPredicted RBP18.61■□□□□ 0.57
NUCB1-205ENST00000443560 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
NUCB1-205ENST00000443560 BAG3O95817 575 aa18.6■□□□□ 0.57
NUCB1-205ENST00000443560 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
NUCB1-205ENST00000443560 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
NUCB1-205ENST00000443560 HMGCRP04035 888 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 PLCG2P16885 1265 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 RRP1BQ14684 758 aaKnown RBP18.59■□□□□ 0.57
NUCB1-205ENST00000443560 TTC39AQ5SRH9 613 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
NUCB1-205ENST00000443560 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.57
NUCB1-205ENST00000443560 DHX36Q9H2U1 1008 aaKnown RBP18.59■□□□□ 0.57
NUCB1-205ENST00000443560 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 AATFQ9NY61 560 aaKnown RBP eCLIP18.59■□□□□ 0.574e-8■■■■■ 78.2
NUCB1-205ENST00000443560 PI4KBQ9UBF8 816 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 TNNQ9UQP3 1299 aa18.59■□□□□ 0.57
NUCB1-205ENST00000443560 PLXNB2O15031 1838 aa18.58■□□□□ 0.57
NUCB1-205ENST00000443560 IRX3P78415 501 aaPredicted RBP18.58■□□□□ 0.56
NUCB1-205ENST00000443560 OS9Q13438 667 aaPredicted RBP18.58■□□□□ 0.56
NUCB1-205ENST00000443560 SH3D19Q5HYK7 790 aa18.58■□□□□ 0.56
NUCB1-205ENST00000443560 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.56
NUCB1-205ENST00000443560 PAWRQ96IZ0 340 aaKnown RBP18.58■□□□□ 0.56
NUCB1-205ENST00000443560 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.56
NUCB1-205ENST00000443560 CRISPLD2Q9H0B8 497 aa18.58■□□□□ 0.56
NUCB1-205ENST00000443560 PRO3102Q9H379 93 aa18.58■□□□□ 0.56
NUCB1-205ENST00000443560 TMOD4Q9NZQ9 345 aa18.58■□□□□ 0.56
NUCB1-205ENST00000443560 MYH1P12882 1939 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 ASNSP08243 561 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 MTMR2Q13614 643 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 CCDC158Q5M9N0 1113 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 NECAB2Q7Z6G3 386 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
NUCB1-205ENST00000443560 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
NUCB1-205ENST00000443560 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 BCAR3O75815 825 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 BACE1P56817 501 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 TNNI3KQ59H18 835 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 TGFBRAP1Q8WUH2 860 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 FPGT-TNNI3KV9GXZ4 949 aa18.56■□□□□ 0.56
NUCB1-205ENST00000443560 FLT1P17948 1338 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 DDX60LQ5H9U9 1706 aaKnown RBP18.55■□□□□ 0.56
NUCB1-205ENST00000443560 LAMA3Q16787 3333 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 A0A1W2PPC1 479 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 PPP4CP60510 307 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 ANKLE1Q8NAG6 615 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 DIS3LQ8TF46 1054 aaKnown RBP18.55■□□□□ 0.56
NUCB1-205ENST00000443560 DBNDD2Q9BQY9 259 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
NUCB1-205ENST00000443560 MORF4L1Q9UBU8 362 aa18.55■□□□□ 0.56
NUCB1-205ENST00000443560 GJD2Q9UKL4 321 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms