RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MMP10P09238 476 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 XRN1Q8IZH2 1706 aaKnown RBP12.12□□□□□ -0.47
CALD1-210ENST00000443197 PDE4CQ08493 712 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 C17orf53Q8N3J3 647 aaPredicted RBP12.12□□□□□ -0.47
CALD1-210ENST00000443197 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 USP40Q9NVE5 1235 aa12.12□□□□□ -0.47
CALD1-210ENST00000443197 PTGS1P23219 599 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 TNNI2P48788 182 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 GRAPQ13588 217 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 RILPL1Q5EBL4 403 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 KCNH3Q9ULD8 1083 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 GSG1L2A8MUP6 293 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 PARP1P09874 1014 aaKnown RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 NR5A1Q13285 461 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
CALD1-210ENST00000443197 RBM28Q9NW13 759 aaKnown RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
CALD1-210ENST00000443197 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 NMT2O60551 498 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 KLRK1P26718 216 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 EPS15P42566 896 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
CALD1-210ENST00000443197 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
CALD1-210ENST00000443197 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 LTN1O94822 1766 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 BCL9O00512 1426 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 UQCRHP07919 91 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 ALDH1B1P30837 517 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 ZYXQ15942 572 aaKnown RBP12.1□□□□□ -0.47
CALD1-210ENST00000443197 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 ATL3Q6DD88 541 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 LRP10Q7Z4F1 713 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 ZKSCAN5Q9Y2L8 839 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 CALML3P27482 149 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 NDUFA8P51970 172 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
CALD1-210ENST00000443197 UBASH3AP57075 661 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 NOSTRINQ8IVI9 506 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
CALD1-210ENST00000443197 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
CALD1-210ENST00000443197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CALD1-210ENST00000443197 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
CALD1-210ENST00000443197 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
CALD1-210ENST00000443197 RXRBP28702 533 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 ARID4AP29374 1257 aaPredicted RBP12.09□□□□□ -0.47
CALD1-210ENST00000443197 STAT6P42226 847 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 RESTQ13127 1097 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 MB21D2Q8IYB1 491 aaPredicted RBP12.09□□□□□ -0.47
CALD1-210ENST00000443197 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 LRRC47Q8N1G4 583 aaKnown RBP12.09□□□□□ -0.47
CALD1-210ENST00000443197 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 IFNKQ9P0W0 207 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 PFKFB1P16118 471 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 CDC27P30260 824 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 CCDC178Q5BJE1 867 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 RRAGBQ5VZM2 374 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 ADALQ6DHV7 355 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 LARGE2Q8N3Y3 721 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
CALD1-210ENST00000443197 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.47
CALD1-210ENST00000443197 PPIP5K2O43314 1243 aa12.08□□□□□ -0.47
CALD1-210ENST00000443197 BBOX1O75936 387 aa12.08□□□□□ -0.47
CALD1-210ENST00000443197 PDE6BP35913 854 aa12.08□□□□□ -0.47
CALD1-210ENST00000443197 MNS1Q8NEH6 495 aa12.08□□□□□ -0.47
CALD1-210ENST00000443197 C6orf50Q9HD87 102 aa12.08□□□□□ -0.47
CALD1-210ENST00000443197 CAVIN2O95810 425 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 DDIT3P35638 169 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 TMEM266Q2M3C6 531 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 FRMPD2Q68DX3 1309 aaPredicted RBP12.08□□□□□ -0.48
CALD1-210ENST00000443197 EXOSC10Q01780 885 aaKnown RBP12.08□□□□□ -0.48
CALD1-210ENST00000443197 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
CALD1-210ENST00000443197 ELP1O95163 1332 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 YEATS4O95619 227 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 CLCN1P35523 988 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 CACNB3P54284 484 aa12.08□□□□□ -0.48
CALD1-210ENST00000443197 KIF23Q02241 960 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms