RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 MAP3K10Q02779 954 aa21.89■■□□□ 1.09
HDAC6-208ENST00000438518 PPARAQ07869 468 aa21.89■■□□□ 1.09
HDAC6-208ENST00000438518 CDCA5Q96FF9 252 aa21.89■■□□□ 1.09
HDAC6-208ENST00000438518 SWAP70Q9UH65 585 aa21.89■■□□□ 1.09
HDAC6-208ENST00000438518 MCCP23508 829 aa21.88■■□□□ 1.09
HDAC6-208ENST00000438518 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-208ENST00000438518 TRIM34Q9BYJ4 488 aa21.88■■□□□ 1.09
HDAC6-208ENST00000438518 RNF41Q9H4P4 317 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-208ENST00000438518 PAPPA2Q9BXP8 1791 aa21.87■■□□□ 1.09
HDAC6-208ENST00000438518 MINDY4BA8MYZ0 360 aa21.87■■□□□ 1.09
HDAC6-208ENST00000438518 ITGBL1O95965 494 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-208ENST00000438518 PLCD1P51178 756 aa21.87■■□□□ 1.09
HDAC6-208ENST00000438518 NECTIN1Q15223 517 aa21.87■■□□□ 1.09
HDAC6-208ENST00000438518 NBPF12Q5TAG4 269 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-208ENST00000438518 UPF2Q9HAU5 1272 aaKnown RBP21.87■■□□□ 1.09
HDAC6-208ENST00000438518 PPP1R12BO60237 982 aaPredicted RBP21.86■■□□□ 1.09
HDAC6-208ENST00000438518 FKBP1BP68106 108 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 GABPAQ06546 454 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 PDE4BQ07343 736 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 C16orf86Q6ZW13 317 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 USP26Q9BXU7 913 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 BACH2Q9BYV9 841 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 SCAF8Q9UPN6 1271 aaKnown RBP21.86■■□□□ 1.09
HDAC6-208ENST00000438518 SSC5DA1L4H1 1573 aa21.86■■□□□ 1.09
HDAC6-208ENST00000438518 ZNF341Q9BYN7 854 aa21.85■■□□□ 1.09
HDAC6-208ENST00000438518 UNCXA6NJT0 531 aa21.84■■□□□ 1.09
HDAC6-208ENST00000438518 CYP21A2P08686 494 aa21.84■■□□□ 1.09
HDAC6-208ENST00000438518 ZKSCAN1P17029 563 aaPredicted RBP21.84■■□□□ 1.09
HDAC6-208ENST00000438518 HSPA4P34932 840 aa21.84■■□□□ 1.09
HDAC6-208ENST00000438518 PASKQ96RG2 1323 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 FGRP09769 529 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 CYP2D6P10635 497 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 AKNAD1Q5T1N1 836 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 CREB3L3Q68CJ9 461 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 CDAN1Q8IWY9 1227 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 CNNM2Q9H8M5 875 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.83■■□□□ 1.09
HDAC6-208ENST00000438518 GINM1Q9NU53 330 aa21.83■■□□□ 1.09
HDAC6-208ENST00000438518 CYP2D7A0A087X1C5 515 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 SLC27A2O14975 620 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 IREB2P48200 963 aaKnown RBP21.82■■□□□ 1.08
HDAC6-208ENST00000438518 KRT32Q14532 448 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 MAP3K11Q16584 847 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 SLC4A8Q2Y0W8 1093 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 TSGA10IPQ3SY00 556 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 TATDN1Q6P1N9 297 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 MFSD6Q6ZSS7 791 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 KCNB2Q92953 911 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 CCDC17Q96LX7 622 aa21.82■■□□□ 1.08
HDAC6-208ENST00000438518 ATAD5Q96QE3 1844 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 TRAF5O00463 557 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 ORC4O43929 436 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 CDK8P49336 464 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 HAND2P61296 217 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 PRAMEF18Q5VWM3 479 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 ARMC9Q7Z3E5 817 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 DNAJC18Q9H819 358 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 MKNK2Q9HBH9 465 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 ZNF112Q9UJU3 913 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 DOCK1Q14185 1865 aa21.81■■□□□ 1.08
HDAC6-208ENST00000438518 OTOFQ9HC10 1997 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 SEC24BO95487 1268 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 ANAPC15P60006 121 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 CTDSPL2Q05D32 466 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 TRDNQ13061 729 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 MIGA2Q7L4E1 593 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 KLRG1Q96E93 195 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 KRT23Q9C075 422 aa21.8■■□□□ 1.08
HDAC6-208ENST00000438518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
HDAC6-208ENST00000438518 SHMT1P34896 483 aa21.79■■□□□ 1.08
HDAC6-208ENST00000438518 ZNF444Q8N0Y2 327 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-208ENST00000438518 C2orf69Q8N8R5 385 aa21.79■■□□□ 1.08
HDAC6-208ENST00000438518 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.79■■□□□ 1.08
HDAC6-208ENST00000438518 DYNLL2Q96FJ2 89 aa21.79■■□□□ 1.08
HDAC6-208ENST00000438518 CTNND1O60716 968 aaKnown RBP21.78■■□□□ 1.08
HDAC6-208ENST00000438518 CELF2O95319 508 aaKnown RBP21.78■■□□□ 1.08
HDAC6-208ENST00000438518 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-208ENST00000438518 TBC1D10CQ8IV04 446 aa21.78■■□□□ 1.08
HDAC6-208ENST00000438518 NCOA7Q8NI08 942 aa21.78■■□□□ 1.08
HDAC6-208ENST00000438518 ESR2Q92731 530 aa21.78■■□□□ 1.08
HDAC6-208ENST00000438518 NBPF3Q9H094 633 aa21.78■■□□□ 1.08
HDAC6-208ENST00000438518 GBA2Q9HCG7 927 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-208ENST00000438518 GREB1LQ9C091 1923 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-208ENST00000438518 PLIN4Q96Q06 1357 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 PHF20L1A8MW92 1017 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 E7EWF7 191 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 USP2O75604 605 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-208ENST00000438518 EVX2Q03828 476 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 TTLL12Q14166 644 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-208ENST00000438518 RALYLQ86SE5 291 aaKnown RBP21.77■■□□□ 1.08
HDAC6-208ENST00000438518 ANKRD13AQ8IZ07 590 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 WRNIP1Q96S55 665 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 ZNF408Q9H9D4 720 aa21.77■■□□□ 1.08
HDAC6-208ENST00000438518 ANGEL1Q9UNK9 670 aaKnown RBP21.77■■□□□ 1.08
HDAC6-208ENST00000438518 ASNSP08243 561 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
HDAC6-208ENST00000438518 RASA1P20936 1047 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 CAP2P40123 477 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 PPP4R3BQ5MIZ7 849 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms