RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 CPSF6Q16630 551 aaKnown RBP eCLIP4.23□□□□□ -1.73
AC009541.1-201ENST00000438279 GOLM1Q8NBJ4 401 aa4.23□□□□□ -1.73
AC009541.1-201ENST00000438279 ZNF296Q8WUU4 475 aaPredicted RBP4.23□□□□□ -1.73
AC009541.1-201ENST00000438279 JARID2Q92833 1246 aaPredicted RBP4.23□□□□□ -1.73
AC009541.1-201ENST00000438279 SEMA6BQ9H3T3 888 aa4.23□□□□□ -1.73
AC009541.1-201ENST00000438279 HMX2A2RU54 273 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 ADAM23O75077 832 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 BPNT1O95861 308 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 NFICP08651 508 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 CDK8P49336 464 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 FAM160A1Q05DH4 1040 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 NFIAQ12857 509 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 KIAA0825Q8IV33 1275 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 GATA6Q92908 595 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 TGIF2Q9GZN2 237 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 C1GALT1Q9NS00 363 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 CSADQ9Y600 493 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 ITGB7P26010 798 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 RACK1P63244 317 aaKnown RBP4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 NFKBIBQ15653 356 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 ZNF394Q53GI3 561 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 REC114Q7Z4M0 266 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 ZAR1Q86SH2 424 aa4.22□□□□□ -1.73
AC009541.1-201ENST00000438279 RNGTTO60942 597 aaKnown RBP4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 HCLS1P14317 486 aaPredicted RBP4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 PDE4BQ07343 736 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 RAD51AP2Q09MP3 1159 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 NT5DC4Q86YG4 428 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 SLITRK4Q8IW52 837 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 PSMG3-AS1Q96PY0 264 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 SPON2Q9BUD6 331 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 PICK1Q9NRD5 415 aa4.21□□□□□ -1.73
AC009541.1-201ENST00000438279 GRK4P32298 578 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 CWF19L2Q2TBE0 894 aaKnown RBP4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 PRSS36Q5K4E3 855 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 TMEM201Q5SNT2 666 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 HID1Q8IV36 788 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 GIMAP7Q8NHV1 300 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 EAF1Q96JC9 268 aaPredicted RBP4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 POLR3KQ9Y2Y1 108 aaPredicted RBP4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 DAGLAQ9Y4D2 1042 aa4.21□□□□□ -1.74
AC009541.1-201ENST00000438279 PRAMEF27A3QJZ7 478 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 ATE1O95260 518 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 CDC37L1Q7L3B6 337 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 MRPL41Q8IXM3 137 aaKnown RBP4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 SPATA32Q96LK8 384 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 PCDHGB7Q9Y5F8 929 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 DYNC1LI2O43237 492 aaPredicted RBP4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 CYP27A1Q02318 531 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 SLBPQ14493 270 aaKnown RBP eCLIP4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 ZDHHC13Q8IUH4 622 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 REXO1Q8N1G1 1221 aaKnown RBP4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 FBXO27Q8NI29 283 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 METTL22Q9BUU2 404 aaPredicted RBP4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 EHMT1Q9H9B1 1298 aa4.2□□□□□ -1.74
AC009541.1-201ENST00000438279 LRIG2O94898 1065 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 F13BP05160 661 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 ADMP35318 185 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 CRKP46108 304 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 ETF1P62495 437 aaKnown RBP4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 COL9A2Q14055 689 aaPredicted RBP4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 SLC6A19Q695T7 634 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 OGFOD3Q6PK18 319 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 UBE3DQ7Z6J8 389 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 RASGRP4Q8TDF6 673 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 NKD1Q969G9 470 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 FOXQ1Q9C009 403 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 FBRSQ9HAH7 460 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 SSU72Q9NP77 194 aaKnown RBP4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 CST3P01034 146 aaPredicted RBP4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 PGRP06401 933 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 MCATQ8IVS2 390 aaKnown RBP4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 SHKBP1Q8TBC3 707 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 TMEM87BQ96K49 555 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 MFSD14AQ96MC6 490 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 TBC1D32Q96NH3 1257 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 UBP1Q9NZI7 540 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 TJP2Q9UDY2 1190 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 RNF112Q9ULX5 631 aa4.19□□□□□ -1.74
AC009541.1-201ENST00000438279 PRR19A6NJB7 356 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 GJA8P48165 433 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 APOBRQ0VD83 1088 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 C9orf131Q5VYM1 1079 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 MFSD2AQ8NA29 543 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 ATG3Q9NT62 314 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 ERCC5P28715 1186 aaPredicted RBP4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 ZNF165P49910 485 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 PAK2Q13177 524 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 ARMCX6Q7L4S7 300 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 ACSF2Q96CM8 615 aaPredicted RBP4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 BRMS1Q9HCU9 246 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 TLR3O15455 904 aaKnown RBP4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 HTR3BO95264 441 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 PLCG1P19174 1290 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 CDK5R2Q13319 367 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 NKG7Q16617 165 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 CYP27C1Q4G0S4 372 aa4.18□□□□□ -1.74
AC009541.1-201ENST00000438279 SEZ6Q53EL9 994 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms