RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01516-201ENST00000436140 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
LINC01516-201ENST00000436140 KRT85P78386 507 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.37
LINC01516-201ENST00000436140 GIMAP6Q6P9H5 292 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
LINC01516-201ENST00000436140 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 VAT1LQ9HCJ6 419 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 BCORQ6W2J9 1755 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
LINC01516-201ENST00000436140 A0A087WWV3 80 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 PLCB2Q00722 1185 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 RTN1Q16799 776 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.38
LINC01516-201ENST00000436140 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 BICD2Q8TD16 824 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 USP28Q96RU2 1077 aa12.71□□□□□ -0.38
LINC01516-201ENST00000436140 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.38
LINC01516-201ENST00000436140 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.38
LINC01516-201ENST00000436140 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
LINC01516-201ENST00000436140 LDHCP07864 332 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 IL1R1P14778 569 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
LINC01516-201ENST00000436140 TMEM87BQ96K49 555 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 TCHHQ07283 1943 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 ECE2O60344 883 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 LIG1P18858 919 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
LINC01516-201ENST00000436140 SHROOM1Q2M3G4 852 aaPredicted RBP12.7□□□□□ -0.38
LINC01516-201ENST00000436140 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 COA1Q9GZY4 146 aa12.7□□□□□ -0.38
LINC01516-201ENST00000436140 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
LINC01516-201ENST00000436140 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
LINC01516-201ENST00000436140 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
LINC01516-201ENST00000436140 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
LINC01516-201ENST00000436140 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
LINC01516-201ENST00000436140 PDE4BQ07343 736 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 LRP5O75197 1615 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 ME1P48163 572 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 GSTO1P78417 241 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
LINC01516-201ENST00000436140 RESTQ13127 1097 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 VPS54Q9P1Q0 977 aa12.69□□□□□ -0.38
LINC01516-201ENST00000436140 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
LINC01516-201ENST00000436140 KRT40Q6A162 431 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 NBPF11Q86T75 865 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
LINC01516-201ENST00000436140 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
LINC01516-201ENST00000436140 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
LINC01516-201ENST00000436140 BTBD18B2RXH4 712 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
LINC01516-201ENST00000436140 LAMB2P55268 1798 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 NR5A1Q13285 461 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 SPECC1Q5M775 1068 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 CATIPQ7Z7H3 387 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
LINC01516-201ENST00000436140 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 RHBDL3P58872 404 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
LINC01516-201ENST00000436140 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
LINC01516-201ENST00000436140 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 HOMER1Q86YM7 354 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 IL27Q8NEV9 243 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 EYA3Q99504 573 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
LINC01516-201ENST00000436140 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
LINC01516-201ENST00000436140 FLT1P17948 1338 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 CDK8P49336 464 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 TRIM29Q14134 588 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 NTRK3Q16288 839 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 RBSNQ9H1K0 784 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
LINC01516-201ENST00000436140 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms