RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
LINC00028-201ENST00000435497 ALPK3Q96L96 1907 aa16.83■□□□□ 0.28
LINC00028-201ENST00000435497 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
LINC00028-201ENST00000435497 GJD2Q9UKL4 321 aa16.83■□□□□ 0.28
LINC00028-201ENST00000435497 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
LINC00028-201ENST00000435497 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 EVI5O60447 810 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
LINC00028-201ENST00000435497 CAPN2P17655 700 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 MTX1Q13505 466 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 MVPQ14764 893 aaKnown RBP16.82■□□□□ 0.28
LINC00028-201ENST00000435497 PAWRQ96IZ0 340 aaKnown RBP16.82■□□□□ 0.28
LINC00028-201ENST00000435497 NEUROD6Q96NK8 337 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
LINC00028-201ENST00000435497 SOX1O00570 391 aaPredicted RBP16.81■□□□□ 0.28
LINC00028-201ENST00000435497 CAP2P40123 477 aa16.81■□□□□ 0.28
LINC00028-201ENST00000435497 SPATA5Q8NB90 893 aa16.81■□□□□ 0.28
LINC00028-201ENST00000435497 ZNF280CQ8ND82 737 aa16.81■□□□□ 0.28
LINC00028-201ENST00000435497 DIS3LQ8TF46 1054 aaKnown RBP16.81■□□□□ 0.28
LINC00028-201ENST00000435497 STAP2Q9UGK3 403 aa16.81■□□□□ 0.28
LINC00028-201ENST00000435497 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
LINC00028-201ENST00000435497 LDHCP07864 332 aa16.8■□□□□ 0.28
LINC00028-201ENST00000435497 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
LINC00028-201ENST00000435497 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
LINC00028-201ENST00000435497 HMGCS2P54868 508 aa16.8■□□□□ 0.28
LINC00028-201ENST00000435497 SH3D19Q5HYK7 790 aa16.8■□□□□ 0.28
LINC00028-201ENST00000435497 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00028-201ENST00000435497 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
LINC00028-201ENST00000435497 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
LINC00028-201ENST00000435497 ATAD5Q96QE3 1844 aa16.8■□□□□ 0.28
LINC00028-201ENST00000435497 LOC285556D6RIA3 1793 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 GNAI3P08754 354 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
LINC00028-201ENST00000435497 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
LINC00028-201ENST00000435497 GSTO1P78417 241 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 TRIM32Q13049 653 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 ARHGAP45Q92619 1136 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 COL6A3P12111 3177 aa16.79■□□□□ 0.28
LINC00028-201ENST00000435497 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
LINC00028-201ENST00000435497 PLXNB2O15031 1838 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 A0A1W2PPC1 479 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 MCAMP43121 646 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 JAG1P78504 1218 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 NECAB2Q7Z6G3 386 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 SH3RF3Q8TEJ3 882 aaPredicted RBP16.78■□□□□ 0.28
LINC00028-201ENST00000435497 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 RAI14Q9P0K7 980 aa16.78■□□□□ 0.28
LINC00028-201ENST00000435497 PEX10O60683 326 aa16.77■□□□□ 0.28
LINC00028-201ENST00000435497 HMGCRP04035 888 aa16.77■□□□□ 0.28
LINC00028-201ENST00000435497 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.28
LINC00028-201ENST00000435497 TNNQ9UQP3 1299 aa16.77■□□□□ 0.28
LINC00028-201ENST00000435497 SIPA1L1O43166 1804 aa16.77■□□□□ 0.27
LINC00028-201ENST00000435497 RPTORQ8N122 1335 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC00028-201ENST00000435497 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
LINC00028-201ENST00000435497 GDF15Q99988 308 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
LINC00028-201ENST00000435497 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
LINC00028-201ENST00000435497 BACE1P56817 501 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
LINC00028-201ENST00000435497 TRIB2Q92519 343 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 HMX1Q9NP08 348 aaPredicted RBP16.75■□□□□ 0.27
LINC00028-201ENST00000435497 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 A0A0C4DFX4 3053 aa16.75■□□□□ 0.27
LINC00028-201ENST00000435497 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
LINC00028-201ENST00000435497 BMP8BP34820 402 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 PPP4CP60510 307 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00028-201ENST00000435497 MTMR2Q13614 643 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
LINC00028-201ENST00000435497 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 TXNRD2Q9NNW7 524 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 SNRKQ9NRH2 765 aa16.74■□□□□ 0.27
LINC00028-201ENST00000435497 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00028-201ENST00000435497 ZMYND8Q9ULU4 1186 aaPredicted RBP16.74■□□□□ 0.27
LINC00028-201ENST00000435497 GNAI2P04899 355 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 UQCRFS1P1P0C7P4 283 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 CYP2B6P20813 491 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 Q3C1V9 767 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 MAP3K21Q5TCX8 1036 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 ADGRA1Q86SQ6 560 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 C7orf61Q8IZ16 206 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 TGFBRAP1Q8WUH2 860 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
LINC00028-201ENST00000435497 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 OGDHLQ9ULD0 1010 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
LINC00028-201ENST00000435497 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
LINC00028-201ENST00000435497 TRIM27P14373 513 aa16.72■□□□□ 0.27
LINC00028-201ENST00000435497 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms