RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 LDHCP07864 332 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 DIS3LQ8TF46 1054 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 OSBPL5Q9H0X9 879 aaPredicted RBP14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 SOX1O00570 391 aaPredicted RBP14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 GCLCP48506 637 aaPredicted RBP14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 HMGCS2P54868 508 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 GSTO1P78417 241 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 PABPC4Q13310 644 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 SLC17A8Q8NDX2 589 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 ZNF384Q8TF68 577 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 LRCH3Q96II8 777 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 HMG20BQ9P0W2 317 aa14.34□□□□□ -0.11
CHRNA1-207ENST00000435083 SRGAP3O43295 1099 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 HMGCRP04035 888 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 CAP2P40123 477 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 RAI14Q9P0K7 980 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 ATAD5Q96QE3 1844 aa14.33□□□□□ -0.12
CHRNA1-207ENST00000435083 ALPK3Q96L96 1907 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 RRP1BQ14684 758 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 PI16Q6UXB8 463 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 SPATA5Q8NB90 893 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 TBC1D2Q9BYX2 928 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 HMX1Q9NP08 348 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 ZMYND8Q9ULU4 1186 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
CHRNA1-207ENST00000435083 MAP4K4O95819 1239 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 GNAI3P08754 354 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 TRIM32Q13049 653 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 TEX11Q8IYF3 940 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 AS3MTQ9HBK9 375 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 RPTORQ8N122 1335 aa14.31□□□□□ -0.12
CHRNA1-207ENST00000435083 DLL1O00548 723 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 CYP2B6P20813 491 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 IRX3P78415 501 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 SH3RF3Q8TEJ3 882 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 GDF15Q99988 308 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 NBPF3Q9H094 633 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 LRP2BPQ9P2M1 347 aa14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 HERC5Q9UII4 1024 aaKnown RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 COL2A1P02458 1487 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-207ENST00000435083 SYN1P17600 705 aa14.29□□□□□ -0.12
CHRNA1-207ENST00000435083 C11orf49Q9H6J7 331 aa14.29□□□□□ -0.12
CHRNA1-207ENST00000435083 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
CHRNA1-207ENST00000435083 MORF4L1Q9UBU8 362 aa14.29□□□□□ -0.12
CHRNA1-207ENST00000435083 ARID4AP29374 1257 aaPredicted RBP14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 BMP8BP34820 402 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 MTX1Q13505 466 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 MTMR2Q13614 643 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 TRIB2Q92519 343 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 P2RX7Q99572 595 aaKnown RBP14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 WDR18Q9BV38 432 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 PI4KBQ9UBF8 816 aa14.28□□□□□ -0.12
CHRNA1-207ENST00000435083 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 PEX10O60683 326 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 UQCRFS1P1P0C7P4 283 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 MCAMP43121 646 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 G3BP1Q13283 466 aaKnown RBP eCLIP14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 DHX36Q9H2U1 1008 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 SNRKQ9NRH2 765 aa14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 DDX60LQ5H9U9 1706 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-207ENST00000435083 SZT2Q5T011 3432 aa14.27□□□□□ -0.13
CHRNA1-207ENST00000435083 BAG3O95817 575 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 ASNSP08243 561 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 BACE1P56817 501 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 JAG1P78504 1218 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 MAPKAPK5Q8IW41 473 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 CCAR1Q8IX12 1150 aaKnown RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 TGFBRAP1Q8WUH2 860 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 TRIM34Q9BYJ4 488 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 OGDHLQ9ULD0 1010 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 MAGEA10P43363 369 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 HERVK_113P62684 666 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 NAA16Q6N069 864 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
CHRNA1-207ENST00000435083 TXNRD2Q9NNW7 524 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms