RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 PXDNQ92626 1479 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 SP4Q02446 784 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 SEPT11Q9NVA2 429 aaKnown RBP14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 ZSWIM5Q9P217 1185 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 MEGF6O75095 1541 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 BTDP43251 543 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CACNB3P54284 484 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 GSDMDP57764 484 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 UBE3CQ15386 1083 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CUL5Q93034 780 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CLIC6Q96NY7 704 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 PARP1P09874 1014 aaKnown RBP14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CALM1P0DP23 149 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CALM2P0DP24 149 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CALM3P0DP25 149 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 CCDC12Q8WUD4 166 aaPredicted RBP14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 GPR108Q9NPR9 543 aa14.22□□□□□ -0.13
LRRTM1-206ENST00000433224 GNAQP50148 359 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 UBASH3AP57075 661 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 RTL9Q8NET4 1388 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 FRMPD2Q68DX3 1309 aaPredicted RBP14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 DEXIO95424 95 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 TCERG1LQ5VWI1 586 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 LEKR1Q6ZMV7 388 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 EEF2KMTQ96G04 330 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 MINPP1Q9UNW1 487 aa14.21□□□□□ -0.13
LRRTM1-206ENST00000433224 PFKFB2O60825 505 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 CYP2D6P10635 497 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 CCDC70Q6NSX1 233 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 SYT10Q6XYQ8 523 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 BRAPQ7Z569 592 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 FANCBQ8NB91 859 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 CCDC102AQ96A19 550 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 CALML4Q96GE6 196 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 HDAC9Q9UKV0 1011 aa14.21□□□□□ -0.14
LRRTM1-206ENST00000433224 SIGLEC1Q9BZZ2 1709 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 MTIF2P46199 727 aaKnown RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 GNG11P61952 73 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 CT47A1Q5JQC4 288 aaPredicted RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 MYSM1Q5VVJ2 828 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 APOA5Q6Q788 366 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 GJD4Q96KN9 370 aaPredicted RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 MMRN2Q9H8L6 949 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 NRBP1Q9UHY1 535 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 BCS1LQ9Y276 419 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 RGS12O14924 1447 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 ZNF75DP51815 510 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 GRM1Q13255 1194 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 CUL4AQ13619 759 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 USH1GQ495M9 461 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 LLPHQ9BRT6 129 aaKnown RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 CWC15Q9P013 229 aaKnown RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 SSH2Q76I76 1423 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 COL15A1P39059 1388 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 N4BP3O15049 544 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 ASIC1P78348 528 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 FAM160A1Q05DH4 1040 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 RAD51AP2Q09MP3 1159 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 NUP88Q99567 741 aaPredicted RBP14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 RAB34Q9BZG1 259 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 CPVLQ9H3G5 476 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 ZBTB21Q9ULJ3 1066 aa14.2□□□□□ -0.14
LRRTM1-206ENST00000433224 CLRN2A0PK11 232 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 EPB41L2O43491 1005 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 SLU7O95391 586 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 CAVIN2O95810 425 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 FAM193AP78312 1265 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 PLS1Q14651 629 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ARHGAP29Q52LW3 1261 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 TRIM47Q96LD4 638 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 CLIC4Q9Y696 253 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ZNF827Q17R98 1081 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 AXDND1Q5T1B0 1012 aaPredicted RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 CPXCR1Q8N123 301 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 C6orf50Q9HD87 102 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ZNF202O95125 648 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 POLD1P28340 1107 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 MECOMQ03112 1051 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 THRAP3Q9Y2W1 955 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 RXRBP28702 533 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 TXKP42681 527 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 SLC44A5Q8NCS7 719 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms