RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PSMC1P62191 440 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-202ENST00000429713 BHMTQ93088 406 aa8.4□□□□□ -1.06
SYNPO2-202ENST00000429713 NEK1Q96PY6 1258 aa8.4□□□□□ -1.06
SYNPO2-202ENST00000429713 KCND1Q9NSA2 647 aa8.4□□□□□ -1.06
SYNPO2-202ENST00000429713 MTUS1Q9ULD2 1270 aa8.4□□□□□ -1.06
SYNPO2-202ENST00000429713 KAT6AQ92794 2004 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 ARHGAP10A1A4S6 786 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 UBASH3AP57075 661 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 JPH2Q9BR39 696 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 VAMP4O75379 141 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 PTGS1P23219 599 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 DRC3Q9H069 523 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 SLFN14P0C7P3 912 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 AK2P54819 239 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 DACT1Q9NYF0 836 aa8.4□□□□□ -1.07
SYNPO2-202ENST00000429713 CIB2O75838 187 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 MIER3Q7Z3K6 550 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 SPDL1Q96EA4 605 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 NUP88Q99567 741 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC8Q9H0W5 538 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 BIN1O00499 593 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 ACBD5Q5T8D3 534 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CIDEBQ9UHD4 219 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 MAP3K2Q9Y2U5 619 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 NECAB1Q8N987 351 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 STXBP3O00186 592 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 TM6SF1Q9BZW5 370 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 C21orf2O43822 256 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CABP4P57796 275 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 FBXO38Q6PIJ6 1188 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 MYH1P12882 1939 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 MYH4Q9Y623 1939 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 SNUPNO95149 360 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CFAP61Q8NHU2 1237 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 BAG1Q99933 345 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 ORC3Q9UBD5 711 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-202ENST00000429713 CASQ2O14958 399 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 AHCYL1O43865 530 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 SYCP2LQ5T4T6 812 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 RUNDC3BQ96NL0 473 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 SEPT11Q9NVA2 429 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 FBLN1P23142 703 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CRELD2Q6UXH1 353 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 KLHL23Q8NBE8 558 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CALR3Q96L12 384 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 SMTNP53814 917 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 IL1RAPL1Q9NZN1 696 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 LRRIQ3A6PVS8 624 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 ZNF213O14771 459 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 SERPINB8P50452 374 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 EPHB4P54760 987 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 MKRN3Q13064 507 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CROCCQ5TZA2 2017 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CASZ1Q86V15 1759 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 EIF2AQ9BY44 585 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 CLCN6P51797 869 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 POLE3Q9NRF9 147 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 PPLO60437 1756 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 ABCA6Q8N139 1617 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 BLVRAP53004 296 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 MYL5Q02045 173 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 GLI2P10070 1586 aa8.38□□□□□ -1.07
SYNPO2-202ENST00000429713 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 ANKRD26Q9UPS8 1709 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 IKBKBO14920 756 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 ATF3P18847 181 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 MAATS1Q7Z4T9 603 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 PARP2Q9UGN5 583 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 TRIM37O94972 964 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 KRT4P19013 534 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 IDI1Q13907 227 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms