RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
HLA-F-219ENST00000429294 DOCK1Q14185 1865 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 RANBP2P49792 3224 aaKnown RBP16.14■□□□□ 0.17
HLA-F-219ENST00000429294 GNAI2P04899 355 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
HLA-F-219ENST00000429294 SPP2Q13103 211 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 NSUN4Q96CB9 384 aaKnown RBP16.14■□□□□ 0.17
HLA-F-219ENST00000429294 AS3MTQ9HBK9 375 aa16.14■□□□□ 0.17
HLA-F-219ENST00000429294 BAG3O95817 575 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 PLCG2P16885 1265 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 CCDC84Q86UT8 332 aaPredicted RBP16.13■□□□□ 0.17
HLA-F-219ENST00000429294 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 DEFB118Q96PH6 123 aa16.13■□□□□ 0.17
HLA-F-219ENST00000429294 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
HLA-F-219ENST00000429294 PTPRFP10586 1907 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 USP17L5A8MUK1 530 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 EVI5O60447 810 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
HLA-F-219ENST00000429294 CAP2P40123 477 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 TREML2Q5T2D2 321 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
HLA-F-219ENST00000429294 RBM27Q9P2N5 1060 aaKnown RBP16.12■□□□□ 0.17
HLA-F-219ENST00000429294 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.12■□□□□ 0.17
HLA-F-219ENST00000429294 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
HLA-F-219ENST00000429294 COL2A1P02458 1487 aaPredicted RBP16.11■□□□□ 0.17
HLA-F-219ENST00000429294 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
HLA-F-219ENST00000429294 HMGCS2P54868 508 aa16.11■□□□□ 0.17
HLA-F-219ENST00000429294 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
HLA-F-219ENST00000429294 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
HLA-F-219ENST00000429294 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-219ENST00000429294 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-219ENST00000429294 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-219ENST00000429294 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-219ENST00000429294 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 NECAB2Q7Z6G3 386 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 ZNF384Q8TF68 577 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-219ENST00000429294 TMOD4Q9NZQ9 345 aa16.1■□□□□ 0.17
HLA-F-219ENST00000429294 HMGCRP04035 888 aa16.09■□□□□ 0.17
HLA-F-219ENST00000429294 ASNSP08243 561 aa16.09■□□□□ 0.17
HLA-F-219ENST00000429294 TRIM27P14373 513 aa16.09■□□□□ 0.17
HLA-F-219ENST00000429294 MCAMP43121 646 aa16.09■□□□□ 0.17
HLA-F-219ENST00000429294 CRACR2BQ8N4Y2 399 aaPredicted RBP16.09■□□□□ 0.17
HLA-F-219ENST00000429294 ASCC2Q9H1I8 757 aaPredicted RBP16.09■□□□□ 0.17
HLA-F-219ENST00000429294 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
HLA-F-219ENST00000429294 IGSF3O75054 1194 aa16.08■□□□□ 0.16
HLA-F-219ENST00000429294 SH3D19Q5HYK7 790 aa16.08■□□□□ 0.16
HLA-F-219ENST00000429294 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 SH3RF3Q8TEJ3 882 aaPredicted RBP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.16
HLA-F-219ENST00000429294 WDR18Q9BV38 432 aa16.08■□□□□ 0.16
HLA-F-219ENST00000429294 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 HMX1Q9NP08 348 aaPredicted RBP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.16
HLA-F-219ENST00000429294 SZT2Q5T011 3432 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 A0A1W2PPC1 479 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 BACE1P56817 501 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
HLA-F-219ENST00000429294 ANKLE1Q8NAG6 615 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
HLA-F-219ENST00000429294 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 GPR108Q9NPR9 543 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 GINM1Q9NU53 330 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
HLA-F-219ENST00000429294 C19orf81C9J6K1 198 aa16.06■□□□□ 0.16
HLA-F-219ENST00000429294 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
HLA-F-219ENST00000429294 PPP4CP60510 307 aa16.06■□□□□ 0.16
HLA-F-219ENST00000429294 MTMR2Q13614 643 aa16.06■□□□□ 0.16
HLA-F-219ENST00000429294 TGFBRAP1Q8WUH2 860 aa16.06■□□□□ 0.16
HLA-F-219ENST00000429294 USP17L10C9JJH3 530 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 PRO3102Q9H379 93 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 MORF4L1Q9UBU8 362 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
HLA-F-219ENST00000429294 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
HLA-F-219ENST00000429294 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
HLA-F-219ENST00000429294 BCAR3O75815 825 aa16.04■□□□□ 0.16
HLA-F-219ENST00000429294 HOXA7P31268 230 aaPredicted RBP16.04■□□□□ 0.16
HLA-F-219ENST00000429294 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
HLA-F-219ENST00000429294 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
HLA-F-219ENST00000429294 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
HLA-F-219ENST00000429294 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
HLA-F-219ENST00000429294 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
HLA-F-219ENST00000429294 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms