RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 PLCD1P51178 756 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZNF280AP59817 542 aaPredicted RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 ME3Q16798 604 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 IGDCC4Q8TDY8 1250 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZNF274Q96GC6 653 aaPredicted RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 DHX36Q9H2U1 1008 aaKnown RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 DDX4Q9NQI0 724 aaKnown RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 TMOD2Q9NZR1 351 aa14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
HMGB3P4-201ENST00000428776 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 RANBP6O60518 1105 aaKnown RBP14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 ENTPD3O75355 529 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 LARGE1O95461 756 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 LIFRP42702 1097 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 C16orf86Q6ZW13 317 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 TMTC2Q8N394 836 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 NKX2-3Q8TAU0 364 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZBED3Q96IU2 234 aaPredicted RBP14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 SLKQ9H2G2 1235 aaPredicted RBP14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
HMGB3P4-201ENST00000428776 ERICH2A1L162 156 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 SH2B2O14492 632 aaPredicted RBP14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 IFIT3O14879 490 aaKnown RBP14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 MYO1BO43795 1136 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 HLA-DOAP06340 250 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 DDIT3P35638 169 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 GMPSP49915 693 aaPredicted RBP14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 EVX2Q03828 476 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 NFIAQ12857 509 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 TMEM67Q5HYA8 995 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 FKBP1CQ5VVH2 108 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 IQCA1Q86XH1 822 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 GPC2Q8N158 579 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 DYNLL2Q96FJ2 89 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 UBAC1Q9BSL1 405 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 MKNK2Q9HBH9 465 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 MYOZ2Q9NPC6 264 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZNF70Q9UC06 446 aaPredicted RBP14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZNF541Q9H0D2 1346 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 MYH6P13533 1939 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 PFKFB2O60825 505 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 PRDM1O75626 825 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 CDK8P49336 464 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 SLC4A8Q2Y0W8 1093 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 SGMS1Q86VZ5 419 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZSCAN10Q96SZ4 725 aaPredicted RBP14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 EHD4Q9H223 541 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 LY9Q9HBG7 655 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 CHMP5Q9NZZ3 219 aa14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
HMGB3P4-201ENST00000428776 KLF18A0A0U1RQI7 1052 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 TSPY2A6NKD2 308 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 PDIA3P30101 505 aaKnown RBP14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 CACNB3P54284 484 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 WTAPQ15007 396 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 CCDC178Q5BJE1 867 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 GTF3C6Q969F1 213 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 SWAP70Q9UH65 585 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 CNOT7Q9UIV1 285 aaKnown RBP14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 BRPF3Q9ULD4 1205 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 MYH4Q9Y623 1939 aa14.93□□□□□ -0.02
HMGB3P4-201ENST00000428776 TNKSO95271 1327 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 CCDC69A6NI79 296 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 GRIN3BO60391 1043 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 RASA1P20936 1047 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 TFAP4Q01664 338 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 GABPAQ06546 454 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 TCP10Q12799 353 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 STK3Q13188 491 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 SEC23AQ15436 765 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 GPR162Q16538 588 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 NFXL1Q6ZNB6 911 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 ZKSCAN3Q9BRR0 538 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 TCP11L1Q9NUJ3 509 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 PI4KBQ9UBF8 816 aa14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 POLR2AP24928 1970 aaKnown RBP14.92□□□□□ -0.02
HMGB3P4-201ENST00000428776 H7C1D1 291 aa14.91□□□□□ -0.02
HMGB3P4-201ENST00000428776 WNT10BO00744 389 aa14.91□□□□□ -0.02
HMGB3P4-201ENST00000428776 ST3GAL1Q11201 340 aa14.91□□□□□ -0.02
HMGB3P4-201ENST00000428776 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms