RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CAP2P40123 477 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 GJA8P48165 433 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 PPP4CP60510 307 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 IRF5Q13568 498 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 HABP4Q5JVS0 413 aaKnown RBP21.37■■□□□ 1.01
DDR1-235ENST00000428153 TEX11Q8IYF3 940 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 SMCR8Q8TEV9 937 aaPredicted RBP21.37■■□□□ 1.01
DDR1-235ENST00000428153 PI4KBQ9UBF8 816 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 NOP58Q9Y2X3 529 aaKnown RBP21.37■■□□□ 1.01
DDR1-235ENST00000428153 MAST2Q6P0Q8 1798 aa21.37■■□□□ 1.01
DDR1-235ENST00000428153 PABPC4Q13310 644 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDR1-235ENST00000428153 MTFR1Q15390 333 aa21.36■■□□□ 1.01
DDR1-235ENST00000428153 TTC39AQ5SRH9 613 aa21.36■■□□□ 1.01
DDR1-235ENST00000428153 NAA16Q6N069 864 aaPredicted RBP21.36■■□□□ 1.01
DDR1-235ENST00000428153 ZNF280CQ8ND82 737 aa21.36■■□□□ 1.01
DDR1-235ENST00000428153 PXYLP1Q8TE99 480 aa21.36■■□□□ 1.01
DDR1-235ENST00000428153 MYCP01106 439 aaPredicted RBP21.35■■□□□ 1.01
DDR1-235ENST00000428153 SLURP2P0DP57 97 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 FAM110CQ1W6H9 321 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 SH3D19Q5HYK7 790 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 TMED8Q6PL24 325 aaPredicted RBP21.35■■□□□ 1.01
DDR1-235ENST00000428153 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
DDR1-235ENST00000428153 SHISA4Q96DD7 197 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 GINM1Q9NU53 330 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 LOC285556D6RIA3 1793 aa21.35■■□□□ 1.01
DDR1-235ENST00000428153 USP17L5A8MUK1 530 aa21.34■■□□□ 1.01
DDR1-235ENST00000428153 CCL5P13501 91 aa21.34■■□□□ 1.01
DDR1-235ENST00000428153 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
DDR1-235ENST00000428153 OS9Q13438 667 aaPredicted RBP21.34■■□□□ 1.01
DDR1-235ENST00000428153 METTL16Q86W50 562 aaKnown RBP21.34■■□□□ 1.01
DDR1-235ENST00000428153 CERS3Q8IU89 383 aa21.34■■□□□ 1.01
DDR1-235ENST00000428153 DBNDD2Q9BQY9 259 aa21.34■■□□□ 1.01
DDR1-235ENST00000428153 AS3MTQ9HBK9 375 aa21.34■■□□□ 1.01
DDR1-235ENST00000428153 ZBTB7BO15156 539 aaPredicted RBP21.33■■□□□ 1.01
DDR1-235ENST00000428153 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
DDR1-235ENST00000428153 ECM2O94769 699 aaPredicted RBP21.33■■□□□ 1.01
DDR1-235ENST00000428153 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1.01
DDR1-235ENST00000428153 SPP2Q13103 211 aa21.33■■□□□ 1.01
DDR1-235ENST00000428153 SH3RF3Q8TEJ3 882 aaPredicted RBP21.33■■□□□ 1.01
DDR1-235ENST00000428153 WDR18Q9BV38 432 aa21.33■■□□□ 1.01
DDR1-235ENST00000428153 ATAD5Q96QE3 1844 aa21.33■■□□□ 1.01
DDR1-235ENST00000428153 FAM196BA6NMK8 535 aa21.32■■□□□ 1
DDR1-235ENST00000428153 TNPO2O14787 897 aaKnown RBP21.32■■□□□ 1
DDR1-235ENST00000428153 ASNSP08243 561 aa21.32■■□□□ 1
DDR1-235ENST00000428153 FLT3LGP49771 235 aa21.32■■□□□ 1
DDR1-235ENST00000428153 UBE2Q1Q7Z7E8 422 aa21.32■■□□□ 1
DDR1-235ENST00000428153 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
DDR1-235ENST00000428153 COA7Q96BR5 231 aa21.32■■□□□ 1
DDR1-235ENST00000428153 RNF208Q9H0X6 261 aa21.32■■□□□ 1
DDR1-235ENST00000428153 AATFQ9NY61 560 aaKnown RBP eCLIP21.32■■□□□ 1
DDR1-235ENST00000428153 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.32■■□□□ 1
DDR1-235ENST00000428153 BIN2Q9UBW5 565 aaPredicted RBP21.32■■□□□ 1
DDR1-235ENST00000428153 GABRQQ9UN88 632 aa21.32■■□□□ 1
DDR1-235ENST00000428153 ADCY3O60266 1144 aa21.31■■□□□ 1
DDR1-235ENST00000428153 TREML2Q5T2D2 321 aa21.31■■□□□ 1
DDR1-235ENST00000428153 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
DDR1-235ENST00000428153 FOCADQ5VW36 1801 aa21.31■■□□□ 1
DDR1-235ENST00000428153 FLT1P17948 1338 aa21.3■■□□□ 1
DDR1-235ENST00000428153 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
DDR1-235ENST00000428153 ANKRD13CQ8N6S4 541 aa21.3■■□□□ 1
DDR1-235ENST00000428153 SNRKQ9NRH2 765 aa21.3■■□□□ 1
DDR1-235ENST00000428153 DBNLQ9UJU6 430 aaKnown RBP21.3■■□□□ 1
DDR1-235ENST00000428153 RANBP2P49792 3224 aaKnown RBP21.3■■□□□ 1
DDR1-235ENST00000428153 ZAP70P43403 619 aa21.29■■□□□ 1
DDR1-235ENST00000428153 HMGCS2P54868 508 aa21.29■■□□□ 1
DDR1-235ENST00000428153 RRP1BQ14684 758 aaKnown RBP21.29■■□□□ 1
DDR1-235ENST00000428153 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
DDR1-235ENST00000428153 U2AF1L4Q8WU68 220 aaKnown RBP21.29■■□□□ 1
DDR1-235ENST00000428153 HTATIP2Q9BUP3 242 aa21.29■■□□□ 1
DDR1-235ENST00000428153 SIPA1L1O43166 1804 aa21.29■■□□□ 1
DDR1-235ENST00000428153 CDK5RAP2Q96SN8 1893 aa21.28■■□□□ 1
DDR1-235ENST00000428153 SGPL1O95470 568 aa21.28■■□□□ 1
DDR1-235ENST00000428153 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
DDR1-235ENST00000428153 BACE1P56817 501 aa21.28■■□□□ 1
DDR1-235ENST00000428153 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
DDR1-235ENST00000428153 DOCK3Q8IZD9 2030 aa21.28■■□□□ 1
DDR1-235ENST00000428153 C19orf81C9J6K1 198 aa21.27■■□□□ 1
DDR1-235ENST00000428153 HLA-DOAP06340 250 aa21.27■■□□□ 1
DDR1-235ENST00000428153 ADGRA1Q86SQ6 560 aa21.27■■□□□ 1
DDR1-235ENST00000428153 ERC1Q8IUD2 1116 aa21.27■■□□□ 1
DDR1-235ENST00000428153 MAPKAPK5Q8IW41 473 aa21.27■■□□□ 1
DDR1-235ENST00000428153 ASCC2Q9H1I8 757 aaPredicted RBP21.27■■□□□ 1
DDR1-235ENST00000428153 C1orf115Q9H7X2 142 aa21.27■■□□□ 1
DDR1-235ENST00000428153 MORF4L1Q9UBU8 362 aa21.27■■□□□ 1
DDR1-235ENST00000428153 INHAP05111 366 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 RLBP1P12271 317 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 CEP85Q6P2H3 762 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 CRACR2BQ8N4Y2 399 aaPredicted RBP21.26■□□□□ 0.99
DDR1-235ENST00000428153 EAF2Q96CJ1 260 aaPredicted RBP21.26■□□□□ 0.99
DDR1-235ENST00000428153 TRIM34Q9BYJ4 488 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 UNC93B1Q9H1C4 597 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 DNAJC18Q9H819 358 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 PAK6Q9NQU5 681 aaPredicted RBP21.26■□□□□ 0.99
DDR1-235ENST00000428153 TRIOBPQ9H2D6 2365 aa21.26■□□□□ 0.99
DDR1-235ENST00000428153 H0YGN5 161 aa21.25■□□□□ 0.99
DDR1-235ENST00000428153 PIH1D3Q9NQM4 214 aaKnown RBP21.25■□□□□ 0.99
DDR1-235ENST00000428153 TMOD4Q9NZQ9 345 aa21.25■□□□□ 0.99
DDR1-235ENST00000428153 COLQQ9Y215 455 aaPredicted RBP21.25■□□□□ 0.99
DDR1-235ENST00000428153 MYO5AQ9Y4I1 1855 aaKnown RBP21.25■□□□□ 0.99
DDR1-235ENST00000428153 ZBED9Q6R2W3 1325 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms