RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 C8orf74Q6P047 294 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 UIMC1Q96RL1 719 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 NOD1Q9Y239 953 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 TAF5LO75529 589 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 CLUL1Q15846 466 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 MAP3K19Q56UN5 1328 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 UBL4BQ8N7F7 174 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 HAUS7Q99871 368 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 SH3TC1Q8TE82 1336 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 NOP56O00567 594 aaKnown RBP20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 CETN3O15182 167 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 TBC1D7Q9P0N9 293 aa20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 TTF2Q9UNY4 1162 aaKnown RBP20.03■□□□□ 0.8
ARHGEF28-203ENST00000426542 CUTAO60888 179 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 CIB2O75838 187 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 ADCY7P51828 1080 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 FANCCQ00597 558 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 DIS3L2Q8IYB7 885 aaKnown RBP20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 MYL10Q9BUA6 226 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 CCDC94Q9BW85 323 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 CLSTN2Q9H4D0 955 aa20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.02■□□□□ 0.8
ARHGEF28-203ENST00000426542 USH1GQ495M9 461 aa20.02■□□□□ 0.79
ARHGEF28-203ENST00000426542 TTC31Q49AM3 519 aaPredicted RBP20.02■□□□□ 0.79
ARHGEF28-203ENST00000426542 GINS2Q9Y248 185 aa20.02■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZNF365Q70YC5 407 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 CEP128Q6ZU80 1094 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 SNX29Q8TEQ0 813 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 DYMQ7RTS9 669 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZNF408Q9H9D4 720 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 MAST3O60307 1309 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 ACTN4O43707 911 aaKnown RBP20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 PPANQ9NQ55 473 aaKnown RBP20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 NOX5Q96PH1 765 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 PFDN4Q9NQP4 134 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
ARHGEF28-203ENST00000426542 LACTBP83111 547 aaPredicted RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 HSPA1LP34931 641 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 STMN2Q93045 179 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 TRIM6Q9C030 488 aaPredicted RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 RBSNQ9H1K0 784 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 PIK3C2GO75747 1445 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 LONRF3Q496Y0 759 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 GPIHBP1Q8IV16 184 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 VPS52Q8N1B4 723 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 CCDC110Q8TBZ0 833 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 SECISBP2LQ93073 1101 aaKnown RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 GPHNQ9NQX3 736 aaPredicted RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 FYB2Q5VWT5 728 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 AFAP1L1Q8TED9 768 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 TRIM31Q9BZY9 425 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 GLT8D2Q9H1C3 349 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 STK24Q9Y6E0 443 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 MYCT1Q8N699 235 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 PHKBQ93100 1093 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 LRWD1Q9UFC0 647 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
ARHGEF28-203ENST00000426542 USTQ9Y2C2 406 aa20■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 ERCC3P19447 782 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 U2AF2P26368 475 aaKnown RBP eCLIP19.99■□□□□ 0.798e-7■■■□□ 15.7
ARHGEF28-203ENST00000426542 ITIH3Q06033 890 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 NONOQ15233 471 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 NUP58Q9BVL2 599 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 STK10O94804 968 aaKnown RBP19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 WDR66Q8TBY9 1149 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.792e-11■■■■■ 51.5
ARHGEF28-203ENST00000426542 NLRP12P59046 1061 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 OGFRQ9NZT2 677 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 FAM173BQ6P4H8 233 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 CDAN1Q8IWY9 1227 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 ERO1AQ96HE7 468 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 CALCRLQ16602 461 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 DNM3Q9UQ16 869 aa19.99■□□□□ 0.79
ARHGEF28-203ENST00000426542 TAB2Q9NYJ8 693 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 KAT6BQ8WYB5 2073 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 SLC1A4P43007 532 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 KRT25Q7Z3Z0 450 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 CTTNBP2NLQ9P2B4 639 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 NDUFB9Q9Y6M9 179 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 RAD51AP2Q09MP3 1159 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 BRDTQ58F21 947 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 DPP8Q6V1X1 898 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 SUCLG2Q96I99 432 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 PPP2R5DQ14738 602 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 SLC9C1Q4G0N8 1177 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 CEP85LQ5SZL2 805 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 IGSF3O75054 1194 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZBED4O75132 1171 aa19.98■□□□□ 0.79
ARHGEF28-203ENST00000426542 ZNF202O95125 648 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms