RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
HDAC9-209ENST00000425071 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC9-209ENST00000425071 GOLM1Q8NBJ4 401 aa6.41□□□□□ -1.38
HDAC9-209ENST00000425071 ISL2Q96A47 359 aa6.41□□□□□ -1.38
HDAC9-209ENST00000425071 LRRC3Q9BY71 257 aa6.41□□□□□ -1.38
HDAC9-209ENST00000425071 COPRSQ9NQ92 184 aa6.41□□□□□ -1.38
HDAC9-209ENST00000425071 E9PSI1 815 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 F13A1P00488 732 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 NEFMP07197 916 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 GARTP22102 1010 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 NTF4P34130 210 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 BNC2Q6ZN30 1099 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-209ENST00000425071 HID1Q8IV36 788 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 ZNF296Q8WUU4 475 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-209ENST00000425071 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 NT5C1AQ9BXI3 368 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 C1GALT1Q9NS00 363 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 ADAM30Q9UKF2 790 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 CSADQ9Y600 493 aa6.4□□□□□ -1.38
HDAC9-209ENST00000425071 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 RBM25P49756 843 aaKnown RBP6.39□□□□□ -1.39
HDAC9-209ENST00000425071 ETF1P62495 437 aaKnown RBP6.39□□□□□ -1.39
HDAC9-209ENST00000425071 CWF19L2Q2TBE0 894 aaKnown RBP6.39□□□□□ -1.39
HDAC9-209ENST00000425071 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 OGFOD3Q6PK18 319 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
HDAC9-209ENST00000425071 KIAA0825Q8IV33 1275 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
HDAC9-209ENST00000425071 RNF112Q9ULX5 631 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
HDAC9-209ENST00000425071 LRIG2O94898 1065 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 REC114Q7Z4M0 266 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 GATA6Q92908 595 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 PSMG3-AS1Q96PY0 264 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 ADAMTS1Q9UHI8 967 aa6.38□□□□□ -1.39
HDAC9-209ENST00000425071 WDR64B1ANS9 1081 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 F6X3S4 739 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 GRK4P32298 578 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 GRIK1P39086 918 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 HDLBPQ00341 1268 aaKnown RBP6.37□□□□□ -1.39
HDAC9-209ENST00000425071 MLECQ14165 292 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 TMEM201Q5SNT2 666 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 SLC6A19Q695T7 634 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 INTS5Q6P9B9 1019 aaKnown RBP6.37□□□□□ -1.39
HDAC9-209ENST00000425071 NT5DC4Q86YG4 428 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 ZDHHC13Q8IUH4 622 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 MRPL41Q8IXM3 137 aaKnown RBP6.37□□□□□ -1.39
HDAC9-209ENST00000425071 REXO1Q8N1G1 1221 aaKnown RBP6.37□□□□□ -1.39
HDAC9-209ENST00000425071 MFSD2AQ8NA29 543 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 SHKBP1Q8TBC3 707 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
HDAC9-209ENST00000425071 DYNC1LI2O43237 492 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-209ENST00000425071 F13BP05160 661 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 PGRP06401 933 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 TCF3P15923 654 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 ITGB7P26010 798 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 CDK8P49336 464 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 MCATQ8IVS2 390 aaKnown RBP6.36□□□□□ -1.39
HDAC9-209ENST00000425071 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 FBXL6Q8N531 539 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 LEMD3Q9Y2U8 911 aa6.36□□□□□ -1.39
HDAC9-209ENST00000425071 ATE1O95260 518 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 ADMP35318 185 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 ZNF165P49910 485 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 RACK1P63244 317 aaKnown RBP6.35□□□□□ -1.39
HDAC9-209ENST00000425071 COL9A2Q14055 689 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-209ENST00000425071 SLBPQ14493 270 aaKnown RBP eCLIP6.35□□□□□ -1.39
HDAC9-209ENST00000425071 ZNF394Q53GI3 561 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 NKD1Q969G9 470 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 PRDM10Q9NQV6 1147 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 PIM2Q9P1W9 311 aa6.35□□□□□ -1.39
HDAC9-209ENST00000425071 PRR19A6NJB7 356 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 COBLO75128 1261 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 CST3P01034 146 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-209ENST00000425071 PLCG1P19174 1290 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 YARSP54577 528 aaKnown RBP6.34□□□□□ -1.39
HDAC9-209ENST00000425071 ZNF746Q6NUN9 644 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-209ENST00000425071 ARMCX6Q7L4S7 300 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 ZNF428Q96B54 188 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-209ENST00000425071 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 COX4I2Q96KJ9 171 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 DUSP23Q9BVJ7 150 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 EHMT1Q9H9B1 1298 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.39
HDAC9-209ENST00000425071 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-209ENST00000425071 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
HDAC9-209ENST00000425071 HTR3BO95264 441 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms