RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OSBPL5Q9H0X9 879 aaPredicted RBP15.96■□□□□ 0.15
VRK3-203ENST00000424804 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
VRK3-203ENST00000424804 PICK1Q9NRD5 415 aa15.96■□□□□ 0.15
VRK3-203ENST00000424804 SNRKQ9NRH2 765 aa15.96■□□□□ 0.15
VRK3-203ENST00000424804 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
VRK3-203ENST00000424804 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
VRK3-203ENST00000424804 FPGT-TNNI3KV9GXZ4 949 aa15.96■□□□□ 0.15
VRK3-203ENST00000424804 FOCADQ5VW36 1801 aa15.96■□□□□ 0.14
VRK3-203ENST00000424804 MYPNQ86TC9 1320 aa15.95■□□□□ 0.14
VRK3-203ENST00000424804 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
VRK3-203ENST00000424804 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
VRK3-203ENST00000424804 PPP4CP60510 307 aa15.95■□□□□ 0.14
VRK3-203ENST00000424804 GADL1Q6ZQY3 521 aa15.95■□□□□ 0.14
VRK3-203ENST00000424804 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 HOXD10P28358 340 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 CAP2P40123 477 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 GSTO1P78417 241 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 GORABQ5T7V8 394 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 METTL16Q86W50 562 aaKnown RBP15.94■□□□□ 0.14
VRK3-203ENST00000424804 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
VRK3-203ENST00000424804 DNAJC18Q9H819 358 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.94■□□□□ 0.14
VRK3-203ENST00000424804 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 AGTPBP1Q9UPW5 1226 aa15.94■□□□□ 0.14
VRK3-203ENST00000424804 CCL5P13501 91 aa15.93■□□□□ 0.14
VRK3-203ENST00000424804 FCGRTP55899 365 aa15.93■□□□□ 0.14
VRK3-203ENST00000424804 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
VRK3-203ENST00000424804 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
VRK3-203ENST00000424804 TLR7Q9NYK1 1049 aaKnown RBP15.93■□□□□ 0.14
VRK3-203ENST00000424804 DBNLQ9UJU6 430 aaKnown RBP15.93■□□□□ 0.14
VRK3-203ENST00000424804 MAST2Q6P0Q8 1798 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 GJB1P08034 283 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 MS4A1P11836 297 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 ZAP70P43403 619 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 GJA8P48165 433 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 SPP2Q13103 211 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
VRK3-203ENST00000424804 SH3D19Q5HYK7 790 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 RAET1EQ8TD07 263 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 EAF2Q96CJ1 260 aaPredicted RBP15.92■□□□□ 0.14
VRK3-203ENST00000424804 GCC1Q96CN9 775 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 LRP2BPQ9P2M1 347 aa15.92■□□□□ 0.14
VRK3-203ENST00000424804 RANBP2P49792 3224 aaKnown RBP15.91■□□□□ 0.14
VRK3-203ENST00000424804 SURF6O75683 361 aaKnown RBP15.91■□□□□ 0.14
VRK3-203ENST00000424804 FLT3LGP49771 235 aa15.91■□□□□ 0.14
VRK3-203ENST00000424804 PROCA1Q8NCQ7 364 aaPredicted RBP15.91■□□□□ 0.14
VRK3-203ENST00000424804 ZNF280CQ8ND82 737 aa15.91■□□□□ 0.14
VRK3-203ENST00000424804 UNC93B1Q9H1C4 597 aa15.91■□□□□ 0.14
VRK3-203ENST00000424804 AATFQ9NY61 560 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRK3-203ENST00000424804 PLXNB2O15031 1838 aa15.91■□□□□ 0.14
VRK3-203ENST00000424804 SZT2Q5T011 3432 aa15.91■□□□□ 0.14
VRK3-203ENST00000424804 TRIOBPQ9H2D6 2365 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 IRF5Q13568 498 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 TTC39AQ5SRH9 613 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 NAA16Q6N069 864 aaPredicted RBP15.9■□□□□ 0.14
VRK3-203ENST00000424804 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 CCDC8Q9H0W5 538 aaPredicted RBP15.9■□□□□ 0.14
VRK3-203ENST00000424804 PI4KBQ9UBF8 816 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 HERC5Q9UII4 1024 aaKnown RBP15.9■□□□□ 0.14
VRK3-203ENST00000424804 COLQQ9Y215 455 aaPredicted RBP15.9■□□□□ 0.14
VRK3-203ENST00000424804 COG6Q9Y2V7 657 aa15.9■□□□□ 0.14
VRK3-203ENST00000424804 USP17L5A8MUK1 530 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 H0YGN5 161 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 ADCY3O60266 1144 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 ELNP15502 786 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 HMGCS2P54868 508 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 DYNLL1P63167 89 aaKnown RBP15.89■□□□□ 0.13
VRK3-203ENST00000424804 OS9Q13438 667 aaPredicted RBP15.89■□□□□ 0.13
VRK3-203ENST00000424804 CCDC158Q5M9N0 1113 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 MAPKAPK5Q8IW41 473 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 ANKRD13CQ8N6S4 541 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 SLAIN1Q8ND83 568 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 PXYLP1Q8TE99 480 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 TGFBRAP1Q8WUH2 860 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 WDR18Q9BV38 432 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 FLT1P17948 1338 aa15.89■□□□□ 0.13
VRK3-203ENST00000424804 FXR1P51114 621 aaKnown RBP eCLIP15.88■□□□□ 0.13
VRK3-203ENST00000424804 FAM110CQ1W6H9 321 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 CEP85Q6P2H3 762 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 FOXP4Q8IVH2 680 aaPredicted RBP15.88■□□□□ 0.13
VRK3-203ENST00000424804 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 RNF208Q9H0X6 261 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 ASCC2Q9H1I8 757 aaPredicted RBP15.88■□□□□ 0.13
VRK3-203ENST00000424804 DHX36Q9H2U1 1008 aaKnown RBP15.88■□□□□ 0.13
VRK3-203ENST00000424804 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 NDUFB9Q9Y6M9 179 aa15.88■□□□□ 0.13
VRK3-203ENST00000424804 PEX10O60683 326 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 IGSF3O75054 1194 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 SGPL1O95470 568 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 BAG3O95817 575 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 U2AF1L4Q8WU68 220 aaKnown RBP15.87■□□□□ 0.13
VRK3-203ENST00000424804 ANTXR1Q9H6X2 564 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 MYH1P12882 1939 aa15.87■□□□□ 0.13
VRK3-203ENST00000424804 TNPO2O14787 897 aaKnown RBP15.86■□□□□ 0.13
VRK3-203ENST00000424804 INHAP05111 366 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 HOXA7P31268 230 aaPredicted RBP15.86■□□□□ 0.13
VRK3-203ENST00000424804 BACE1P56817 501 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 UBXN2AP68543 259 aa15.86■□□□□ 0.13
VRK3-203ENST00000424804 NKX2-3Q8TAU0 364 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms