RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DDX60LQ5H9U9 1706 aaKnown RBP15.95■□□□□ 0.14
PRPF39-202ENST00000424478 CLEC10AQ8IUN9 316 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 DNAJC18Q9H819 358 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 KDM4AO75164 1064 aa15.94■□□□□ 0.14
PRPF39-202ENST00000424478 CYB5R4Q7L1T6 521 aa15.94■□□□□ 0.14
PRPF39-202ENST00000424478 RAB11FIP4Q86YS3 637 aa15.94■□□□□ 0.14
PRPF39-202ENST00000424478 L3MBTL3Q96JM7 780 aaPredicted RBP15.94■□□□□ 0.14
PRPF39-202ENST00000424478 ARPP21Q9UBL0 812 aaPredicted RBP15.94■□□□□ 0.14
PRPF39-202ENST00000424478 RANBP6O60518 1105 aaKnown RBP15.94■□□□□ 0.14
PRPF39-202ENST00000424478 NBPF12Q5TAG4 269 aaPredicted RBP15.94■□□□□ 0.14
PRPF39-202ENST00000424478 SIPA1L1O43166 1804 aa15.94■□□□□ 0.14
PRPF39-202ENST00000424478 LAMB1P07942 1786 aa15.94■□□□□ 0.14
PRPF39-202ENST00000424478 AKNAD1Q5T1N1 836 aa15.93■□□□□ 0.14
PRPF39-202ENST00000424478 MAP1SQ66K74 1059 aaPredicted RBP15.93■□□□□ 0.14
PRPF39-202ENST00000424478 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
PRPF39-202ENST00000424478 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
PRPF39-202ENST00000424478 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
PRPF39-202ENST00000424478 CRACR2BQ8N4Y2 399 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-202ENST00000424478 KCNB2Q92953 911 aa15.92■□□□□ 0.14
PRPF39-202ENST00000424478 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-202ENST00000424478 CDK8P49336 464 aa15.92■□□□□ 0.14
PRPF39-202ENST00000424478 ANTXR2P58335 489 aa15.92■□□□□ 0.14
PRPF39-202ENST00000424478 RRP1BQ14684 758 aaKnown RBP15.92■□□□□ 0.14
PRPF39-202ENST00000424478 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
PRPF39-202ENST00000424478 TMED8Q6PL24 325 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-202ENST00000424478 GDF11O95390 407 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 CCDC84Q86UT8 332 aaPredicted RBP15.91■□□□□ 0.14
PRPF39-202ENST00000424478 SPRYD3Q8NCJ5 442 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 MKNK2Q9HBH9 465 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 ZSWIM5Q9P217 1185 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 TRAF5O00463 557 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 JAG1P78504 1218 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 SBK1Q52WX2 424 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 RALYLQ86SE5 291 aaKnown RBP15.91■□□□□ 0.14
PRPF39-202ENST00000424478 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 FAM151AQ8WW52 585 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 TEPSINQ96N21 525 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 SERPINB13Q9UIV8 391 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 ZMYM6O95789 1325 aa15.91■□□□□ 0.14
PRPF39-202ENST00000424478 IGSF3O75054 1194 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 STAG1Q8WVM7 1258 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 ZC3H4Q9UPT8 1303 aaKnown RBP15.9■□□□□ 0.14
PRPF39-202ENST00000424478 PPFIA3O75145 1194 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 ENTPD3O75355 529 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
PRPF39-202ENST00000424478 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
PRPF39-202ENST00000424478 HLA-DOAP06340 250 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 SHMT1P34896 483 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 MOB2Q70IA6 237 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 RUFY3Q7L099 469 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 TTC6Q86TZ1 520 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 NCOA7Q8NI08 942 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 PGAP2Q9UHJ9 254 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 ANAPC4Q9UJX5 808 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
PRPF39-202ENST00000424478 MPHOSPH10O00566 681 aaKnown RBP15.89■□□□□ 0.13
PRPF39-202ENST00000424478 PRC1O43663 620 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 AKR1B1P15121 316 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 RASA1P20936 1047 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 TRDNQ13061 729 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 DCPSQ96C86 337 aaKnown RBP15.89■□□□□ 0.13
PRPF39-202ENST00000424478 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
PRPF39-202ENST00000424478 CYP46A1Q9Y6A2 500 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 IQCA1LA6NCM1 817 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 AK2P54819 239 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 ANAPC15P60006 121 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 TFAP4Q01664 338 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 Q6ZUG5 572 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 PDRG1Q9NUG6 133 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 PI4KBQ9UBF8 816 aa15.89■□□□□ 0.13
PRPF39-202ENST00000424478 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
PRPF39-202ENST00000424478 RXRAP19793 462 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 GABPAQ06546 454 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 C16orf86Q6ZW13 317 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRPF39-202ENST00000424478 SCN4AP35499 1836 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 MYH8P13535 1937 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 LARGE1O95461 756 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 FGD1P98174 961 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 TSGA10IPQ3SY00 556 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 MYL10Q9BUA6 226 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 TRIM34Q9BYJ4 488 aa15.88■□□□□ 0.13
PRPF39-202ENST00000424478 PDE4BQ07343 736 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 STK3Q13188 491 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
PRPF39-202ENST00000424478 SULF1Q8IWU6 871 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 BRF1Q92994 677 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms