RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-206ENST00000421141 BSDC1Q9NW68 430 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-206ENST00000421141 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 FRMD4BQ9Y2L6 1034 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 CEP83Q9Y592 693 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 UBR1Q8IWV7 1749 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 CFBP00751 764 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 AK2P54819 239 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
PTCH1-206ENST00000421141 DSCC1Q9BVC3 393 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 LRRC45Q96CN5 670 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 MED14O60244 1454 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 PRDM1O75626 825 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-206ENST00000421141 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 ICA1Q05084 483 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 STRN3Q13033 797 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 PROSER3Q2NL68 480 aa12.15□□□□□ -0.46
PTCH1-206ENST00000421141 CLRN2A0PK11 232 aa12.15□□□□□ -0.47
PTCH1-206ENST00000421141 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.47
PTCH1-206ENST00000421141 FAM43AQ8N2R8 423 aa12.15□□□□□ -0.47
PTCH1-206ENST00000421141 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.47
PTCH1-206ENST00000421141 BIN1O00499 593 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 CYP27B1O15528 508 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 CHMP2AO43633 222 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 LPXNO60711 386 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 DPP9Q86TI2 863 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 FAM227BQ96M60 508 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
PTCH1-206ENST00000421141 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 USP17L21D6R901 530 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 CCT6AP40227 531 aaKnown RBP12.14□□□□□ -0.47
PTCH1-206ENST00000421141 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 SPTLC2O15270 562 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
PTCH1-206ENST00000421141 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-206ENST00000421141 CALCRLQ16602 461 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 PDE6AP16499 860 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SKAP1Q86WV1 359 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
PTCH1-206ENST00000421141 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 ZSCAN12O43309 604 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SPOUT1Q5T280 376 aaKnown RBP12.13□□□□□ -0.47
PTCH1-206ENST00000421141 OTUD6AQ7L8S5 288 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
PTCH1-206ENST00000421141 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 PLCD1P51178 756 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SV2BQ7L1I2 683 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 REXO1Q8N1G1 1221 aaKnown RBP12.13□□□□□ -0.47
PTCH1-206ENST00000421141 KCNG1Q9UIX4 513 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 GINS2Q9Y248 185 aa12.13□□□□□ -0.47
PTCH1-206ENST00000421141 RPL13P26373 211 aaKnown RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 ZSCAN10Q96SZ4 725 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SSH2Q76I76 1423 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 KIF5CO60282 957 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SKIDA1Q1XH10 827 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 PDE4DQ08499 809 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 RILPL1Q5EBL4 403 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 MED23Q9ULK4 1368 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 MACROD2A1Z1Q3 448 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 KRT25Q7Z3Z0 450 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 FMNL3Q8IVF7 1028 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms