RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 USP17L21D6R901 530 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 IFIT3O14879 490 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 DHX16O60231 1041 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 FGRP09769 529 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ADD1P35611 737 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 METAP2P50579 478 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 EZH2Q15910 746 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 OLFM4Q6UX06 510 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 MICU3Q86XE3 530 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 PANK2Q9BZ23 570 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ZSCAN16Q9H4T2 348 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 TOMM22Q9NS69 142 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ATP8A2Q9NTI2 1148 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ELP1O95163 1332 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ZBTB43O43298 467 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 IGSF3O75054 1194 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 NPR1P16066 1061 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 MRE11P49959 708 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 GUCY1B3Q02153 619 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 SEC23AQ15436 765 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 NTRK3Q16288 839 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 CAMKK2Q96RR4 588 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 MTA3Q9BTC8 594 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
COL12A1-204ENST00000419671 TFIP11Q9UBB9 837 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 ORC3Q9UBD5 711 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
COL12A1-204ENST00000419671 SYCE3A1L190 88 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 CPLX1O14810 134 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 PDE6BP35913 854 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 NFXL1Q6ZNB6 911 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 LEO1Q8WVC0 666 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-204ENST00000419671 GJB4Q9NTQ9 266 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL12A1-204ENST00000419671 SLC12A7Q9Y666 1083 aa9.49□□□□□ -0.89
COL12A1-204ENST00000419671 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 CYP2D6P10635 497 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 WTAPQ15007 396 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SBK1Q52WX2 424 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 ESR2Q92731 530 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 MASTLQ96GX5 879 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SCAND2PQ9GZW5 306 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 ARPP21Q9UBL0 812 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 TNKSO95271 1327 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 UBE2Q2LH0YL09 131 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 PRDM1O75626 825 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 PPP4CP60510 307 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 GSTO1P78417 241 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SART3Q15020 963 aaKnown RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 MFSD14BQ5SR56 506 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 OTUD7BQ6GQQ9 843 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 LRSAM1Q6UWE0 723 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 ENAHQ8N8S7 591 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 FBXO18Q8NFZ0 1043 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 PHKBQ93100 1093 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 SPATA32Q96LK8 384 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 AIFM3Q96NN9 605 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL12A1-204ENST00000419671 FAM205AQ6ZU69 1335 aa9.48□□□□□ -0.89
COL12A1-204ENST00000419671 PSME4Q14997 1843 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 ERICH2A1L162 156 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 ORC4O43929 436 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 USP17L8P0C7I0 530 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 ZNF654Q8IZM8 581 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 MPNDQ8N594 471 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-204ENST00000419671 UBAC1Q9BSL1 405 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 ROBO3Q96MS0 1386 aa9.47□□□□□ -0.89
COL12A1-204ENST00000419671 CDKL5O76039 1030 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 C12orf60Q5U649 245 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 NBPF11Q86T75 865 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 PGBD1Q96JS3 809 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 USP28Q96RU2 1077 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-204ENST00000419671 MFRPQ9BY79 579 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 COA1Q9GZY4 146 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms