RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 POSTNQ15063 836 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PPARAQ07869 468 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 BCL9O00512 1426 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CHRNDQ07001 517 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 NR5A1Q13285 461 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 DDB1Q16531 1140 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ELF2Q15723 593 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SERTAD1Q9UHV2 236 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TNKSO95271 1327 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PTPREP23469 700 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 KCNJ6P48051 423 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 STRCP1A6NGW2 1772 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 URI1O94763 535 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ETF1P62495 437 aaKnown RBP13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FAM237AA0A1B0GTK4 181 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 KRT2P35908 639 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 KLHL10Q6JEL2 608 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 UBXN4Q92575 508 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 DHX58Q96C10 678 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 KCND1Q9NSA2 647 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FOXN1O15353 648 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 RCAN1P53805 252 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SIK1P57059 783 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 DPF2Q92785 391 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ARHGAP6O43182 974 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 BMP15O95972 392 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GYG1P46976 350 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 AFMP43652 599 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TRIML1Q8N9V2 468 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GOLGA6L9A6NEM1 432 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PRDM1O75626 825 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CALM1P0DP23 149 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CALM2P0DP24 149 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CALM3P0DP25 149 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FILIP1LQ4L180 1135 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms