RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 VIL1P09327 827 aaKnown RBP9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 FGRP09769 529 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 PSMA5P28066 241 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 PRDX5P30044 214 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 TTLL5Q6EMB2 1281 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 ANAPC4Q9UJX5 808 aa9.61□□□□□ -0.87
AP001042.1-201ENST00000416842 GAKO14976 1311 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 GPR75-ASB3A0A0A6YYF3 556 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 ST18O60284 1047 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 MBD4O95243 580 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 EVCP57679 992 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 NAA16Q6N069 864 aaPredicted RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 IFNL3Q8IZI9 196 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 LCORLQ8N3X6 602 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 CERS5Q8N5B7 392 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 CFHR5Q9BXR6 569 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 ARMT1Q9H993 441 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 EPB41L4AQ9HCS5 686 aaPredicted RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 ABCF2Q9UG63 623 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 SCAF8Q9UPN6 1271 aaKnown RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
AP001042.1-201ENST00000416842 MYO5AQ9Y4I1 1855 aaKnown RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 E7EWF7 191 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 PRKAB2O43741 272 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 FRAT2O75474 233 aaPredicted RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 LDHCP07864 332 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 GSTO1P78417 241 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 CHAF1AQ13111 956 aaPredicted RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 SBK1Q52WX2 424 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 STRIP1Q5VSL9 837 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 PRAMEF18Q5VWM3 479 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 JAKMIP1Q96N16 626 aaKnown RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 UPF3BQ9BZI7 483 aaKnown RBP9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 CYP46A1Q9Y6A2 500 aa9.59□□□□□ -0.87
AP001042.1-201ENST00000416842 WDR19Q8NEZ3 1342 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 MYH7P12883 1935 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 HTTP42858 3142 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 EN2P19622 333 aaPredicted RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 CASTP20810 708 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 RHBDL3P58872 404 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 DYNLL1P63167 89 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 GTF2IP78347 998 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 IMMTQ16891 758 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 HHIPL2Q6UWX4 724 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 OTOP1Q7RTM1 612 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 CERS3Q8IU89 383 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 INTS4Q96HW7 963 aaKnown RBP9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 TMX3Q96JJ7 454 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 GMLQ99445 158 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 ATP8A2Q9NTI2 1148 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 TRIM17Q9Y577 477 aa9.58□□□□□ -0.88
AP001042.1-201ENST00000416842 ZNF213O14771 459 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 CPA1P15085 419 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 AK2P54819 239 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 SREBF2Q12772 1141 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MFSD14BQ5SR56 506 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 BLOC1S2Q6QNY1 142 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MB21D2Q8IYB1 491 aaPredicted RBP9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MIGA1Q8NAN2 632 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 AGBL3Q8NEM8 1001 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MTA3Q9BTC8 594 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MYOZ2Q9NPC6 264 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 DCP1AQ9NPI6 582 aaPredicted RBP9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
AP001042.1-201ENST00000416842 MROH7-TTC4A0A0A0MT08 1334 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 DLL1O00548 723 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 ANKRD1Q15327 319 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 CTR9Q6PD62 1173 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 TBC1D10CQ8IV04 446 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 SLF2Q8IX21 1173 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 ZSCAN31Q96LW9 406 aaPredicted RBP9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 NACAP1Q9BZK3 213 aa9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 CWC22Q9HCG8 908 aaKnown RBP9.56□□□□□ -0.88
AP001042.1-201ENST00000416842 TPCN1Q9ULQ1 816 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms