RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 CNTNAP4Q9C0A0 1308 aa11.5□□□□□ -0.57
LINC00494-201ENST00000416742 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
LINC00494-201ENST00000416742 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
LINC00494-201ENST00000416742 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
LINC00494-201ENST00000416742 USP21Q9UK80 565 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00494-201ENST00000416742 FBXO33Q7Z6M2 555 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 MECOMQ03112 1051 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 NR5A1Q13285 461 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 PTPAQ15257 358 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 SHC4Q6S5L8 630 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.49□□□□□ -0.57
LINC00494-201ENST00000416742 AMIGO3Q86WK7 504 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 ZNF384Q8TF68 577 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 FAM13BQ9NYF5 915 aa11.49□□□□□ -0.57
LINC00494-201ENST00000416742 DEXIO95424 95 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 PRDX5P30044 214 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 RFC4P35249 363 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 TERF1P54274 439 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 EVX2Q03828 476 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 C4BP0C0L5 1744 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 STK36Q9NRP7 1315 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 COL1A1P02452 1464 aaPredicted RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 PPP6R2O75170 966 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 MMP1P03956 469 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 IQCA1Q86XH1 822 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ZSCAN10Q96SZ4 725 aaPredicted RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 MAP3K14Q99558 947 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ANKRD2Q9GZV1 360 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ARAP2Q8WZ64 1704 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ENAHQ8N8S7 591 aaPredicted RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 NSUN4Q96CB9 384 aaKnown RBP11.48□□□□□ -0.57
LINC00494-201ENST00000416742 ANKIB1Q9P2G1 1089 aa11.48□□□□□ -0.57
LINC00494-201ENST00000416742 NLRP12P59046 1061 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 HSP90AA2PQ14568 343 aaPredicted RBP11.47□□□□□ -0.57
LINC00494-201ENST00000416742 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 SPTLC3Q9NUV7 552 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 SMC2O95347 1197 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 PNOCQ13519 176 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 SEC23AQ15436 765 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 NBPF11Q86T75 865 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CNNM3Q8NE01 707 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
LINC00494-201ENST00000416742 VPS54Q9P1Q0 977 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CUTAO60888 179 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 CYP2D6P10635 497 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 BRIP1Q9BX63 1249 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
LINC00494-201ENST00000416742 DOCK2Q92608 1830 aa11.46□□□□□ -0.57
LINC00494-201ENST00000416742 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
LINC00494-201ENST00000416742 TRAPPC3LQ5T215 181 aa11.46□□□□□ -0.57
LINC00494-201ENST00000416742 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
LINC00494-201ENST00000416742 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
LINC00494-201ENST00000416742 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
LINC00494-201ENST00000416742 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.57
LINC00494-201ENST00000416742 NMT2O60551 498 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 LONRF3Q496Y0 759 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 PDILTQ8N807 584 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 CHD4Q14839 1912 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.58
LINC00494-201ENST00000416742 TPM4P67936 248 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.58
LINC00494-201ENST00000416742 GRIN1Q05586 938 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 RESP18Q5W5W9 173 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.58
LINC00494-201ENST00000416742 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.58
LINC00494-201ENST00000416742 SEMA3EO15041 775 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 XBP1P17861 261 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 MEX3CQ5U5Q3 659 aaKnown RBP11.45□□□□□ -0.58
LINC00494-201ENST00000416742 RGS22Q8NE09 1264 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 TSC1Q92574 1164 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 DCP1AQ9NPI6 582 aaPredicted RBP11.45□□□□□ -0.58
LINC00494-201ENST00000416742 IFNKQ9P0W0 207 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 BAZ2BQ9UIF8 2168 aaKnown RBP11.45□□□□□ -0.58
LINC00494-201ENST00000416742 CDC25BP30305 580 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 RILPL1Q5EBL4 403 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 FOXP1Q9H334 677 aaPredicted RBP11.45□□□□□ -0.58
LINC00494-201ENST00000416742 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
LINC00494-201ENST00000416742 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms