RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 MTX1Q13505 466 aa19.06■□□□□ 0.64
DDX56-202ENST00000415758 MEIS3Q99687 375 aa19.06■□□□□ 0.64
DDX56-202ENST00000415758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDX56-202ENST00000415758 LDHCP07864 332 aa19.05■□□□□ 0.64
DDX56-202ENST00000415758 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
DDX56-202ENST00000415758 TFCP2Q12800 502 aa19.05■□□□□ 0.64
DDX56-202ENST00000415758 SPP2Q13103 211 aa19.05■□□□□ 0.64
DDX56-202ENST00000415758 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
DDX56-202ENST00000415758 ZNF280CQ8ND82 737 aa19.05■□□□□ 0.64
DDX56-202ENST00000415758 LOC285556D6RIA3 1793 aa19.05■□□□□ 0.64
DDX56-202ENST00000415758 GSTO1P78417 241 aa19.04■□□□□ 0.64
DDX56-202ENST00000415758 ANKLE1Q8NAG6 615 aa19.04■□□□□ 0.64
DDX56-202ENST00000415758 NSUN4Q96CB9 384 aaKnown RBP19.04■□□□□ 0.64
DDX56-202ENST00000415758 HMG20BQ9P0W2 317 aa19.04■□□□□ 0.64
DDX56-202ENST00000415758 GJD2Q9UKL4 321 aa19.04■□□□□ 0.64
DDX56-202ENST00000415758 SRGAP3O43295 1099 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 GNAI3P08754 354 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 CAP2P40123 477 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 PABPC4Q13310 644 aaKnown RBP eCLIP19.03■□□□□ 0.64
DDX56-202ENST00000415758 SH3D19Q5HYK7 790 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 NECAB2Q7Z6G3 386 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 SPATA5Q8NB90 893 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 ARHGAP45Q92619 1136 aa19.03■□□□□ 0.64
DDX56-202ENST00000415758 PAWRQ96IZ0 340 aaKnown RBP19.03■□□□□ 0.64
DDX56-202ENST00000415758 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.64
DDX56-202ENST00000415758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.03■□□□□ 0.64
DDX56-202ENST00000415758 ALPK3Q96L96 1907 aa19.02■□□□□ 0.64
DDX56-202ENST00000415758 FAM196BA6NMK8 535 aa19.02■□□□□ 0.64
DDX56-202ENST00000415758 USP17L5A8MUK1 530 aa19.02■□□□□ 0.64
DDX56-202ENST00000415758 HERC5Q9UII4 1024 aaKnown RBP19.02■□□□□ 0.64
DDX56-202ENST00000415758 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.63
DDX56-202ENST00000415758 HMGCRP04035 888 aa19.01■□□□□ 0.63
DDX56-202ENST00000415758 ARID4AP29374 1257 aaPredicted RBP19.01■□□□□ 0.63
DDX56-202ENST00000415758 HMGCS2P54868 508 aa19.01■□□□□ 0.63
DDX56-202ENST00000415758 RRP1BQ14684 758 aaKnown RBP19.01■□□□□ 0.63
DDX56-202ENST00000415758 NEUROD6Q96NK8 337 aa19.01■□□□□ 0.63
DDX56-202ENST00000415758 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
DDX56-202ENST00000415758 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
DDX56-202ENST00000415758 RPTORQ8N122 1335 aa19■□□□□ 0.63
DDX56-202ENST00000415758 BMP8BP34820 402 aa19■□□□□ 0.63
DDX56-202ENST00000415758 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
DDX56-202ENST00000415758 ASCC2Q9H1I8 757 aaPredicted RBP19■□□□□ 0.63
DDX56-202ENST00000415758 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
DDX56-202ENST00000415758 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
DDX56-202ENST00000415758 MORF4L1Q9UBU8 362 aa19■□□□□ 0.63
DDX56-202ENST00000415758 PI16Q6UXB8 463 aa18.99■□□□□ 0.63
DDX56-202ENST00000415758 DIS3LQ8TF46 1054 aaKnown RBP18.99■□□□□ 0.63
DDX56-202ENST00000415758 GDF15Q99988 308 aa18.99■□□□□ 0.63
DDX56-202ENST00000415758 WDR18Q9BV38 432 aa18.99■□□□□ 0.63
DDX56-202ENST00000415758 HMX1Q9NP08 348 aaPredicted RBP18.99■□□□□ 0.63
DDX56-202ENST00000415758 COL6A3P12111 3177 aa18.98■□□□□ 0.63
DDX56-202ENST00000415758 PLXNB2O15031 1838 aa18.98■□□□□ 0.63
DDX56-202ENST00000415758 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
DDX56-202ENST00000415758 HOXA7P31268 230 aaPredicted RBP18.98■□□□□ 0.63
DDX56-202ENST00000415758 MNX1P50219 401 aaPredicted RBP18.98■□□□□ 0.63
DDX56-202ENST00000415758 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
DDX56-202ENST00000415758 GORABQ5T7V8 394 aa18.98■□□□□ 0.63
DDX56-202ENST00000415758 TEX11Q8IYF3 940 aa18.98■□□□□ 0.63
DDX56-202ENST00000415758 DHX36Q9H2U1 1008 aaKnown RBP18.98■□□□□ 0.63
DDX56-202ENST00000415758 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
DDX56-202ENST00000415758 UQCRFS1P1P0C7P4 283 aa18.97■□□□□ 0.63
DDX56-202ENST00000415758 MCAMP43121 646 aa18.97■□□□□ 0.63
DDX56-202ENST00000415758 BACE1P56817 501 aa18.97■□□□□ 0.63
DDX56-202ENST00000415758 GPR153Q6NV75 609 aa18.97■□□□□ 0.63
DDX56-202ENST00000415758 METTL16Q86W50 562 aaKnown RBP18.97■□□□□ 0.63
DDX56-202ENST00000415758 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
DDX56-202ENST00000415758 ASNSP08243 561 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 XRCC5P13010 732 aaKnown RBP18.96■□□□□ 0.63
DDX56-202ENST00000415758 TRIM32Q13049 653 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 MAP3K21Q5TCX8 1036 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 TRIB2Q92519 343 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 LRCH3Q96II8 777 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 OGDHLQ9ULD0 1010 aa18.96■□□□□ 0.63
DDX56-202ENST00000415758 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 C19orf81C9J6K1 198 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 IGSF3O75054 1194 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 PPP4CP60510 307 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 FOXP4Q8IVH2 680 aaPredicted RBP18.95■□□□□ 0.62
DDX56-202ENST00000415758 SLC17A8Q8NDX2 589 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
DDX56-202ENST00000415758 GINM1Q9NU53 330 aa18.95■□□□□ 0.62
DDX56-202ENST00000415758 BAG3O95817 575 aa18.94■□□□□ 0.62
DDX56-202ENST00000415758 PLCG2P16885 1265 aa18.94■□□□□ 0.62
DDX56-202ENST00000415758 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
DDX56-202ENST00000415758 G3BP1Q13283 466 aaKnown RBP eCLIP18.94■□□□□ 0.625e-8■□□□□ 8.8
DDX56-202ENST00000415758 MTMR2Q13614 643 aa18.94■□□□□ 0.62
DDX56-202ENST00000415758 P2RX7Q99572 595 aaKnown RBP18.94■□□□□ 0.62
DDX56-202ENST00000415758 NOL10Q9BSC4 688 aaKnown RBP18.94■□□□□ 0.62
DDX56-202ENST00000415758 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 GNAI2P04899 355 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 JAG1P78504 1218 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 C7orf61Q8IZ16 206 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 GPRC5AQ8NFJ5 357 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 SOCS4Q8WXH5 440 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 NUDT12Q9BQG2 462 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 C11orf49Q9H6J7 331 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 DNAJC18Q9H819 358 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 TXNRD2Q9NNW7 524 aa18.93■□□□□ 0.62
DDX56-202ENST00000415758 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms