RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CCDC97Q96F63 343 aaPredicted RBP4.78□□□□□ -1.64
LINC00428-201ENST00000415620 KRT82Q9NSB4 513 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 GTF2IRD1Q9UHL9 959 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 FAAP100Q0VG06 881 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 CYFIP1Q7L576 1253 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 FAM214BQ7L5A3 538 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 TOP6BLQ8N6T0 577 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 NPHS2Q9NP85 383 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 MTMR7Q9Y216 660 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 SYNJ1O43426 1573 aa4.77□□□□□ -1.65
LINC00428-201ENST00000415620 IFT140Q96RY7 1462 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 IGHA2P01877 340 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 KRT1P04264 644 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 NEFMP07197 916 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 HCLS1P14317 486 aaPredicted RBP4.76□□□□□ -1.65
LINC00428-201ENST00000415620 ZNF211Q13398 564 aaPredicted RBP4.76□□□□□ -1.65
LINC00428-201ENST00000415620 CIAPIN1Q6FI81 312 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 PDZD3Q86UT5 571 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00428-201ENST00000415620 HEXIM2Q96MH2 286 aaKnown RBP4.76□□□□□ -1.65
LINC00428-201ENST00000415620 FAM129BQ96TA1 746 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 ZC3H12CQ9C0D7 883 aaKnown RBP4.76□□□□□ -1.65
LINC00428-201ENST00000415620 EHD4Q9H223 541 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 EGFL7Q9UHF1 273 aa4.76□□□□□ -1.65
LINC00428-201ENST00000415620 IGF2BP3O00425 579 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00428-201ENST00000415620 NEFLP07196 543 aa4.75□□□□□ -1.65
LINC00428-201ENST00000415620 GSTP1P09211 210 aaKnown RBP4.75□□□□□ -1.65
LINC00428-201ENST00000415620 DIRC2Q96SL1 478 aa4.75□□□□□ -1.65
LINC00428-201ENST00000415620 NSUN3Q9H649 340 aaKnown RBP4.75□□□□□ -1.65
LINC00428-201ENST00000415620 PEG3Q9GZU2 1588 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 TCAF2A6NFQ2 919 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 ICMTO60725 284 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 CPNE3O75131 537 aaKnown RBP4.74□□□□□ -1.65
LINC00428-201ENST00000415620 ORC1Q13415 861 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 KCNA10Q16322 511 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 JAG2Q9Y219 1238 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 AQRO60306 1485 aaKnown RBP eCLIP4.74□□□□□ -1.65
LINC00428-201ENST00000415620 ABCC10Q5T3U5 1492 aa4.74□□□□□ -1.65
LINC00428-201ENST00000415620 TOP2BQ02880 1626 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 GNAT3A8MTJ3 354 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 ABL1P00519 1130 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 GDNFP39905 211 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 CLCN7P51798 805 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 ZC3H12AQ5D1E8 599 aaKnown RBP4.73□□□□□ -1.65
LINC00428-201ENST00000415620 ATG14Q6ZNE5 492 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 SPACA3Q8IXA5 215 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 RELTQ969Z4 430 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 ISL2Q96A47 359 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 CCDC74AQ96AQ1 378 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 CCDC120Q96HB5 630 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 DNAJC25Q9H1X3 360 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 CD320Q9NPF0 282 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 CACNA2D2Q9NY47 1150 aa4.73□□□□□ -1.65
LINC00428-201ENST00000415620 PPRC1Q5VV67 1664 aaKnown RBP4.73□□□□□ -1.65
LINC00428-201ENST00000415620 PITPNM2Q9BZ72 1349 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 PPP1R15AO75807 674 aaPredicted RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 HOXA5P20719 270 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 ZNF157P51786 506 aaPredicted RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 ERVK-24P63145 666 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 ARHGAP4P98171 946 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 GRM2Q14416 872 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 NKPD1Q17RQ9 610 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 RNF214Q8ND24 703 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 CARS2Q9HA77 564 aaKnown RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 DCP1AQ9NPI6 582 aaPredicted RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 PRDM10Q9NQV6 1147 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 BRPF3Q9ULD4 1205 aa4.72□□□□□ -1.65
LINC00428-201ENST00000415620 PCF11O94913 1555 aaKnown RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 TARBP1Q13395 1621 aaKnown RBP4.72□□□□□ -1.65
LINC00428-201ENST00000415620 NUAK1O60285 661 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 MED14OSP0DP75 135 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 NTF4P34130 210 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 NPAS4Q8IUM7 802 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 KCNB2Q92953 911 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 EPB41L4BQ9H329 900 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 TRAK1Q9UPV9 953 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 PRDM2Q13029 1718 aa4.71□□□□□ -1.66
LINC00428-201ENST00000415620 MED1Q15648 1581 aaPredicted RBP4.7□□□□□ -1.66
LINC00428-201ENST00000415620 EIF1AYO14602 144 aaKnown RBP4.7□□□□□ -1.66
LINC00428-201ENST00000415620 GPR182O15218 404 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 GLDCP23378 1020 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 PPP2R3AQ06190 1150 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 PDE3BQ13370 1112 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 STK35Q8TDR2 534 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 KCNN1Q92952 543 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 C20orf173Q96LM9 149 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 CITED4Q96RK1 184 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 SLC26A8Q96RN1 970 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 CSRNP1Q96S65 589 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 FOXQ1Q9C009 403 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 TMEM39AQ9NV64 488 aa4.7□□□□□ -1.66
LINC00428-201ENST00000415620 SMG5Q9UPR3 1016 aaKnown RBP4.7□□□□□ -1.66
LINC00428-201ENST00000415620 SNAPC4Q5SXM2 1469 aa4.69□□□□□ -1.66
LINC00428-201ENST00000415620 CARNS1A5YM72 827 aa4.69□□□□□ -1.66
LINC00428-201ENST00000415620 ETV2O00321 342 aaPredicted RBP4.69□□□□□ -1.66
LINC00428-201ENST00000415620 RING1Q06587 406 aa4.69□□□□□ -1.66
LINC00428-201ENST00000415620 ZNF252P-AS1Q0IIN9 211 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms