RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 DEFB118Q96PH6 123 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 AKAP2Q9Y2D5 859 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 MGAMO43451 1857 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 AK9Q5TCS8 1911 aa15.05■□□□□ 0
LIMS2-210ENST00000413578 SRGAP3O43295 1099 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 ARID4AP29374 1257 aaPredicted RBP15.05■□□□□ -0
LIMS2-210ENST00000413578 CAP2P40123 477 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
LIMS2-210ENST00000413578 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 SPATA5Q8NB90 893 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 ZNF280CQ8ND82 737 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 COA7Q96BR5 231 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.05■□□□□ -0
LIMS2-210ENST00000413578 GJD2Q9UKL4 321 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 PNMA3Q9UL41 463 aa15.05■□□□□ -0
LIMS2-210ENST00000413578 GCLCP48506 637 aaPredicted RBP15.04■□□□□ -0
LIMS2-210ENST00000413578 SPP2Q13103 211 aa15.04■□□□□ -0
LIMS2-210ENST00000413578 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
LIMS2-210ENST00000413578 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -0
LIMS2-210ENST00000413578 LOC285556D6RIA3 1793 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 SOX1O00570 391 aaPredicted RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 EVI5O60447 810 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 GNAI3P08754 354 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 MCAMP43121 646 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 HMGCS2P54868 508 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 GSTO1P78417 241 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 PAWRQ96IZ0 340 aaKnown RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 ASCC2Q9H1I8 757 aaPredicted RBP15.03■□□□□ -0
LIMS2-210ENST00000413578 MORF4L1Q9UBU8 362 aa15.03■□□□□ -0
LIMS2-210ENST00000413578 USP17L5A8MUK1 530 aa15.02■□□□□ -0
LIMS2-210ENST00000413578 HMGCRP04035 888 aa15.02■□□□□ -0
LIMS2-210ENST00000413578 LDHCP07864 332 aa15.02■□□□□ -0
LIMS2-210ENST00000413578 ANKLE1Q8NAG6 615 aa15.02■□□□□ -0
LIMS2-210ENST00000413578 HERC5Q9UII4 1024 aaKnown RBP15.02■□□□□ -0
LIMS2-210ENST00000413578 TRIM32Q13049 653 aa15.01□□□□□ -0.01
LIMS2-210ENST00000413578 METTL16Q86W50 562 aaKnown RBP15.01□□□□□ -0.01
LIMS2-210ENST00000413578 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
LIMS2-210ENST00000413578 GDF15Q99988 308 aa15.01□□□□□ -0.01
LIMS2-210ENST00000413578 WDR18Q9BV38 432 aa15.01□□□□□ -0.01
LIMS2-210ENST00000413578 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
LIMS2-210ENST00000413578 PNMA6EA0A0J9YXQ4 647 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 HOXA7P31268 230 aaPredicted RBP15□□□□□ -0.01
LIMS2-210ENST00000413578 JAG1P78504 1218 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 PABPC4Q13310 644 aaKnown RBP eCLIP15□□□□□ -0.01
LIMS2-210ENST00000413578 MAP3K21Q5TCX8 1036 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 TEX11Q8IYF3 940 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
LIMS2-210ENST00000413578 RAI14Q9P0K7 980 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 STAP2Q9UGK3 403 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 TAOK2Q9UL54 1235 aa15□□□□□ -0.01
LIMS2-210ENST00000413578 RPTORQ8N122 1335 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 DOCK3Q8IZD9 2030 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 TRIM27P14373 513 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 BMP8BP34820 402 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 BACE1P56817 501 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 TRIB2Q92519 343 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 LRCH3Q96II8 777 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 DHX36Q9H2U1 1008 aaKnown RBP14.99□□□□□ -0.01
LIMS2-210ENST00000413578 TXNRD2Q9NNW7 524 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 OGDHLQ9ULD0 1010 aa14.99□□□□□ -0.01
LIMS2-210ENST00000413578 UQCRFS1P1P0C7P4 283 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 PPP4CP60510 307 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 MTMR2Q13614 643 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 ADGRA1Q86SQ6 560 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 P2RX7Q99572 595 aaKnown RBP14.98□□□□□ -0.01
LIMS2-210ENST00000413578 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 SIPA1L1O43166 1804 aa14.98□□□□□ -0.01
LIMS2-210ENST00000413578 FLT1P17948 1338 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 GNAI2P04899 355 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 ASNSP08243 561 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 XRCC5P13010 732 aaKnown RBP14.97□□□□□ -0.01
LIMS2-210ENST00000413578 SHROOM1Q2M3G4 852 aaPredicted RBP14.97□□□□□ -0.01
LIMS2-210ENST00000413578 GORABQ5T7V8 394 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 POTEEQ6S8J3 1075 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 USP6NLQ92738 828 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 NBPF3Q9H094 633 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 HMX1Q9NP08 348 aaPredicted RBP14.97□□□□□ -0.01
LIMS2-210ENST00000413578 GPR108Q9NPR9 543 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 AATFQ9NY61 560 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIMS2-210ENST00000413578 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 ALPK3Q96L96 1907 aa14.97□□□□□ -0.01
LIMS2-210ENST00000413578 PEX10O60683 326 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 IGSF3O75054 1194 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 HERVK_113P62684 666 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 G3BP1Q13283 466 aaKnown RBP eCLIP14.96□□□□□ -0.01
LIMS2-210ENST00000413578 POLA2Q14181 598 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 FOXP4Q8IVH2 680 aaPredicted RBP14.96□□□□□ -0.01
LIMS2-210ENST00000413578 ZNF512BQ96KM6 892 aaPredicted RBP14.96□□□□□ -0.01
LIMS2-210ENST00000413578 GINM1Q9NU53 330 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 RBPJLQ9UBG7 517 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 COL6A3P12111 3177 aa14.96□□□□□ -0.01
LIMS2-210ENST00000413578 PLXNB2O15031 1838 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms