RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 ZBTB43O43298 467 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 HMGN5P82970 282 aaKnown RBP20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 SART3Q15020 963 aaKnown RBP20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 UBAC1Q9BSL1 405 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 CNPY2Q9Y2B0 182 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 SUGT1Q9Y2Z0 365 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 ERICH2A1L162 156 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 ADD1P35611 737 aaKnown RBP20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 SEC23AQ15436 765 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 FAM47AQ5JRC9 791 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 CC2D2BQ6DHV5 1058 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 SLC12A7Q9Y666 1083 aa20.57■□□□□ 0.88
LRPPRC-203ENST00000409946 FLT1P17948 1338 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 CPLX1O14810 134 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 PPIP5K2O43314 1243 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 ORC4O43929 436 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 PLCD1P51178 756 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 FAM173BQ6P4H8 233 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 COL4A5P29400 1685 aa20.56■□□□□ 0.88
LRPPRC-203ENST00000409946 MYH6P13533 1939 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 GOLGA6L3A6NEY3 463 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 PLCG2P16885 1265 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 DACT2Q5SW24 774 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 ENAHQ8N8S7 591 aaPredicted RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 FAM217BQ9NTX9 383 aaPredicted RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 ROBO3Q96MS0 1386 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 H3BQV1 296 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 DHX16O60231 1041 aaKnown RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 NMT2O60551 498 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 GUCY1B3Q02153 619 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 DNM1Q05193 864 aaKnown RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 IFFO2Q5TF58 517 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 CERS3Q8IU89 383 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 KIAA0825Q8IV33 1275 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 SUPT20HQ8NEM7 779 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 MYH8P13535 1937 aa20.55■□□□□ 0.88
LRPPRC-203ENST00000409946 YDJCA8MPS7 323 aa20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 POLR3DP05423 398 aaPredicted RBP20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 PDE4BQ07343 736 aa20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 STRIP1Q5VSL9 837 aa20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 MTA3Q9BTC8 594 aa20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 ORC3Q9UBD5 711 aaPredicted RBP20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 DDX49Q9Y6V7 483 aaKnown RBP20.54■□□□□ 0.88
LRPPRC-203ENST00000409946 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 USP17L3A6NCW0 530 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 USP17L4A6NCW7 530 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 POLD1P28340 1107 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 PICALMQ13492 652 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 USP17L1Q7RTZ2 530 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 CHMP4CQ96CF2 233 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 UPF1Q92900 1129 aaKnown RBP eCLIP20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 PHKBQ93100 1093 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 PPP1R1BQ9UD71 204 aaPredicted RBP20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 ATP6V1DQ9Y5K8 247 aa20.53■□□□□ 0.88
LRPPRC-203ENST00000409946 FIBPO43427 364 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 PDIA4P13667 645 aaKnown RBP20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 CRKP46108 304 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 RESTQ13127 1097 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 SYNE3Q6ZMZ3 975 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 USP48Q86UV5 1035 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 IQCA1Q86XH1 822 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 KLHL34Q8N239 644 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 GPT2Q8TD30 523 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 NUP133Q8WUM0 1156 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 TEKT1Q969V4 418 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 DDX4Q9NQI0 724 aaKnown RBP20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 KIF3AQ9Y496 699 aa20.52■□□□□ 0.88
LRPPRC-203ENST00000409946 NID2Q14112 1375 aa20.52■□□□□ 0.87
LRPPRC-203ENST00000409946 TSPY2A6NKD2 308 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 NTRK3Q16288 839 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 AIFM3Q96NN9 605 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 GJB4Q9NTQ9 266 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 USP40Q9NVE5 1235 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 FER1L6Q2WGJ9 1857 aa20.51■□□□□ 0.87
LRPPRC-203ENST00000409946 UBE2Q2LH0YL09 131 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 GADD45BO75293 160 aaPredicted RBP20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 KLHL40Q2TBA0 621 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 CDC42EP5Q6NZY7 148 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 HHIPL2Q6UWX4 724 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 WDHD1O75717 1129 aaPredicted RBP20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 FKBP1AP62942 108 aaKnown RBP20.5■□□□□ 0.87
LRPPRC-203ENST00000409946 TFAP4Q01664 338 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms