RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 SPTLC2O15270 562 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 GSDMDP57764 484 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 TDRD12Q587J7 1177 aaKnown RBP4.31□□□□□ -1.72
RGPD4-201ENST00000408999 ARHGEF25Q86VW2 580 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 APPBP2Q92624 585 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 CLEC11AQ9Y240 323 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 GJA3Q9Y6H8 435 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 RPS6KL1Q9Y6S9 549 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 IBTKQ9P2D0 1353 aaPredicted RBP4.31□□□□□ -1.72
RGPD4-201ENST00000408999 MAST3O60307 1309 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF532Q9HCE3 1301 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 H0YIN7 160 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 CHGBP05060 677 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 TNNI2P48788 182 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 PROSER3Q2NL68 480 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 KMT5BQ4FZB7 885 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 MSL1Q68DK7 614 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 VPS36Q86VN1 386 aa4.31□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF335Q9H4Z2 1342 aaPredicted RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 PRAMEF22A3QJZ6 481 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TRIM75PA6NK02 468 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 SPDYE3A6NKU9 549 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 ANKRD65E5RJM6 399 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 LMOD1P29536 600 aaPredicted RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 PLA2G4AP47712 749 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF165P49910 485 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 EIF6P56537 245 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TCERG1LQ5VWI1 586 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 BRAPQ7Z569 592 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 KRI1Q8N9T8 703 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 INTS4Q96HW7 963 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 GPCPD1Q9NPB8 672 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TRMT1Q9NXH9 659 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 DACT1Q9NYF0 836 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 PIK3C2BO00750 1634 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 MAP3K15Q6ZN16 1313 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 MROH2AA6NES4 1674 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 SGSM2O43147 1006 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 NEMFO60524 1076 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 CALML3P27482 149 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 CRKLP46109 303 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 AOPEPQ8N6M6 819 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 PAF1Q8N7H5 531 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 ZBTB38Q8NAP3 1195 aaPredicted RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 DNAJC25Q9H1X3 360 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 KIF2AO00139 706 aaPredicted RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 DNA2P51530 1060 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 ASIC1P78348 528 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TRAF1Q13077 416 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TTC6Q86TZ1 520 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 KBTBD3Q8NAB2 608 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 TMEM87BQ96K49 555 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 CENPHQ9H3R5 247 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 WDR17Q8IZU2 1322 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 RIMS1Q86UR5 1692 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 GADD45BO75293 160 aaPredicted RBP4.3□□□□□ -1.72
RGPD4-201ENST00000408999 NEBLO76041 1014 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 NF2P35240 595 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 HSP90AA4PQ58FG1 418 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 WDR66Q8TBY9 1149 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 CLIC6Q96NY7 704 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 ADGRL3Q9HAR2 1447 aa4.3□□□□□ -1.72
RGPD4-201ENST00000408999 EIF3JO75822 258 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF174Q15697 407 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SUPT20HQ8NEM7 779 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ALS2CR12Q96Q35 445 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CTAGE1Q96RT6 745 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 NCOA5Q9HCD5 579 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 FHOD1Q9Y613 1164 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ZNFX1Q9P2E3 1918 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 DEXIO95424 95 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ATP5JP18859 108 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 GNA11P29992 359 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 USP8P40818 1118 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 UBASH3AP57075 661 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CETN1Q12798 172 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 LRRC24Q50LG9 513 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 LEKR1Q6ZMV7 388 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PACS2Q86VP3 889 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 TGFBRAP1Q8WUH2 860 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 C16orf45Q96MC5 204 aaPredicted RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PLIN2Q99541 437 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 NRBP1Q9UHY1 535 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ASAP1Q9ULH1 1129 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ARHGEF40Q8TER5 1519 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 TNS3Q68CZ2 1445 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 UPP2O95045 317 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ZRANB2O95218 330 aaKnown RBP eCLIP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CAVIN2O95810 425 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PCCAP05165 728 aaPredicted RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 TNNT1P13805 278 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ALDH1B1P30837 517 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PDE6BP35913 854 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms