RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 GJB4Q9NTQ9 266 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 PTMAP06454 111 aaKnown RBP7.43□□□□□ -1.22
MRE11-204ENST00000407439 TRIM29Q14134 588 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 CRY2Q49AN0 593 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
MRE11-204ENST00000407439 MEX3CQ5U5Q3 659 aaKnown RBP7.43□□□□□ -1.22
MRE11-204ENST00000407439 SEPT12Q8IYM1 358 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 ZNF654Q8IZM8 581 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 TDRD7Q8NHU6 1098 aaKnown RBP7.43□□□□□ -1.22
MRE11-204ENST00000407439 CERKQ8TCT0 537 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 AIFM3Q96NN9 605 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 MYL10Q9BUA6 226 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 TOMM22Q9NS69 142 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 LRRC4BQ9NT99 713 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 ATP8A2Q9NTI2 1148 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 LEMD3Q9Y2U8 911 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 CLIC4Q9Y696 253 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 TNKSO95271 1327 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 MYH13Q9UKX3 1938 aa7.43□□□□□ -1.22
MRE11-204ENST00000407439 ORC4O43929 436 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 PPP6R2O75170 966 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 PRDX5P30044 214 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 ZNF165P49910 485 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 SSRP1Q08945 709 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 SLC39A14Q15043 492 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 SF3A1Q15459 793 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 STX1AQ16623 288 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 SLC27A3Q5K4L6 730 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 AXDND1Q5T1B0 1012 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 C15orf52Q6ZUT6 534 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 JMYQ8N9B5 988 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 CRNKL1Q9BZJ0 848 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 CBX8Q9HC52 389 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
MRE11-204ENST00000407439 XDHP47989 1333 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 KIAA1551Q9HCM1 1747 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 UBR3Q6ZT12 1888 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 MINDY4BA8MYZ0 360 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 NPHP1O15259 732 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 DEXIO95424 95 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 CMA1P23946 247 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 SPTY2D1Q68D10 685 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 LUZP1Q86V48 1076 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 IQCA1Q86XH1 822 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 ENAHQ8N8S7 591 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 SLC26A6Q9BXS9 759 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 RNF26Q9BY78 433 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 DCP1AQ9NPI6 582 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 ARPP21Q9UBL0 812 aaPredicted RBP7.42□□□□□ -1.22
MRE11-204ENST00000407439 ECM29Q5VYK3 1845 aa7.42□□□□□ -1.22
MRE11-204ENST00000407439 AP5Z1O43299 807 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 MMP1P03956 469 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 NDUFA8P51970 172 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 DYNLL1P63167 89 aaKnown RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 PTPAQ15257 358 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 SBK1Q52WX2 424 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 TXNRD3Q86VQ6 643 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 NOSTRINQ8IVI9 506 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 WDR66Q8TBY9 1149 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 ZSCAN10Q96SZ4 725 aaPredicted RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 ZKSCAN3Q9BRR0 538 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 DNAJC25Q9H1X3 360 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 TFCP2L1Q9NZI6 479 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 GOLGB1Q14789 3259 aaKnown RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 FAM237AA0A1B0GTK4 181 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 OFD1O75665 1012 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 TPM3P06753 285 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 GYS1P13807 737 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 SAFBQ15424 915 aaKnown RBP eCLIP7.41□□□□□ -1.22
MRE11-204ENST00000407439 CCDC24Q8N4L8 307 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 MAP3K14Q99558 947 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.41□□□□□ -1.22
MRE11-204ENST00000407439 FOXP1Q9H334 677 aaPredicted RBP7.41□□□□□ -1.22
MRE11-204ENST00000407439 ANO10Q9NW15 660 aa7.41□□□□□ -1.22
MRE11-204ENST00000407439 AATFQ9NY61 560 aaKnown RBP eCLIP7.41□□□□□ -1.22
MRE11-204ENST00000407439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.41□□□□□ -1.22
MRE11-204ENST00000407439 BAZ2AQ9UIF9 1905 aaKnown RBP7.4□□□□□ -1.22
MRE11-204ENST00000407439 A0A1B0GVL5 298 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 USP17L21D6R901 530 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 STK25O00506 426 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 DDAH1O94760 285 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 CALM1P0DP23 149 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 CALM2P0DP24 149 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 CALM3P0DP25 149 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 HSPA1LP34931 641 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 TROAPQ12815 778 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 IQCB1Q15051 598 aa7.4□□□□□ -1.22
MRE11-204ENST00000407439 IFIT1BQ5T764 474 aaKnown RBP7.4□□□□□ -1.22
MRE11-204ENST00000407439 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms