RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PDXDC2PQ6P474 469 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 METTL3Q86U44 580 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 GTF3C2Q8WUA4 911 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 NELL1Q92832 810 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 KHSRPQ92945 711 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■□□□ 13.8
CLHC1-201ENST00000401408 TBC1D31Q96DN5 1066 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF496Q96IT1 587 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 IWS1Q96ST2 819 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TRIM55Q9BYV6 548 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ATP10DQ9P241 1426 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 LRRC37A3O60309 1634 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ABCC11Q96J66 1382 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 WNK3Q9BYP7 1800 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 HOXC13P31276 330 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SARSP49591 514 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RAB27AP51159 221 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SATB1Q01826 763 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 MCL1Q07820 350 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RASA3Q14644 834 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TSHZ3Q63HK5 1081 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PPP4R3AQ6IN85 833 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZCCHC8Q6NZY4 707 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RASSF3Q86WH2 238 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ANKMY2Q8IV38 441 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CLASRPQ8N2M8 674 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ITFG2Q969R8 447 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 TBC1D20Q96BZ9 403 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SCLT1Q96NL6 688 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CENPOQ9BU64 300 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 XPO4Q9C0E2 1151 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SUDS3Q9H7L9 328 aaPredicted RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF408Q9H9D4 720 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZIM2Q9NZV7 527 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 CHIC2Q9UKJ5 165 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 RABL2BQ9UNT1 228 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PCDHB15Q9Y5E8 787 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PLEKHH1Q9ULM0 1364 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 GTPBP10A4D1E9 387 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 G3V3G9 751 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 TREHO43280 583 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 PIP5K1CO60331 668 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SKIP12755 728 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 HALP42357 657 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 TRIM29Q14134 588 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 HSP90B2PQ58FF3 399 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 WDR45BQ5MNZ6 344 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 RC3H1Q5TC82 1133 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 IL31Q6EBC2 164 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 KLHL10Q6JEL2 608 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 C16orf54Q6UWD8 224 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 MMS22LQ6ZRQ5 1243 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 PTF1AQ7RTS3 328 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF354CQ86Y25 554 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 STK11IPQ8N1F8 1099 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ARL6IP6Q8N6S5 226 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SMARCC1Q92922 1105 aaPredicted RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 CENPTQ96BT3 561 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 NUDT16Q96DE0 195 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 BORCS6Q96GS4 357 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 FEZ1Q99689 392 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SRA1Q9HD15 236 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 SH3GLB2Q9NR46 395 aa4.63□□□□□ -1.67
CLHC1-201ENST00000401408 DNMT3AQ9Y6K1 912 aaPredicted RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 ARHGEF28Q8N1W1 1705 aaKnown RBP4.63□□□□□ -1.67
CLHC1-201ENST00000401408 A6NCN8 305 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C11orf95C9JLR9 678 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 SNX2O60749 519 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 SSBP05455 408 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 NBPF7P0C2Y1 421 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 VARSP26640 1264 aaKnown RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ADD2P35612 726 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 GJA8P48165 433 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 CD151P48509 253 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ST13P50502 369 aaKnown RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 NEK3P51956 506 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 EIF4G2P78344 907 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FKBP4Q02790 459 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 PDE1CQ14123 709 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 DSG2Q14126 1118 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 TKFCQ3LXA3 575 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 CCDC158Q5M9N0 1113 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 JAKMIP3Q5VZ66 844 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C16orf87Q6PH81 154 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 KRT26Q7Z3Y9 468 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 MAATS1Q7Z4T9 603 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 WAPLQ7Z5K2 1190 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 LILRB2Q8N423 598 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 ENAHQ8N8S7 591 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FLCNQ8NFG4 579 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 RNF217Q8TC41 542 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 VMP1Q96GC9 406 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 FAM210AQ96ND0 272 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 C2orf49Q9BVC5 232 aaPredicted RBP4.62□□□□□ -1.67
CLHC1-201ENST00000401408 YY1AP1Q9H869 796 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 TUBGCP6Q96RT7 1819 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 OVOS2A0A0G2JMS6 1433 aa4.62□□□□□ -1.67
CLHC1-201ENST00000401408 OVOS2A0A0J9YW53 1432 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms