RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 VIL1P09327 827 aaKnown RBP13.81□□□□□ -0.2
SKA3-203ENST00000400018 EPS15P42566 896 aa13.81□□□□□ -0.2
SKA3-203ENST00000400018 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
SKA3-203ENST00000400018 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
SKA3-203ENST00000400018 GSTO1P78417 241 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 CPVLQ9H3G5 476 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 LDHCP07864 332 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 PSMA5P28066 241 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 SCRN1Q12765 414 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 GMLQ99445 158 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
SKA3-203ENST00000400018 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
SKA3-203ENST00000400018 ADD1P35611 737 aaKnown RBP13.79□□□□□ -0.2
SKA3-203ENST00000400018 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 TRDNQ13061 729 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 C12orf60Q5U649 245 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 TRPM4Q8TD43 1214 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 WNT10BO00744 389 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 RAD21O60216 631 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 PRKG1Q13976 671 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 OTUD7BQ6GQQ9 843 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 AIFM3Q96NN9 605 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 CDK5RAP2Q96SN8 1893 aa13.79□□□□□ -0.2
SKA3-203ENST00000400018 GDF11O95390 407 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 GNAT2P19087 354 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 PPP4CP60510 307 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 JAG1P78504 1218 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 TFAP4Q01664 338 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
SKA3-203ENST00000400018 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 CNOT7Q9UIV1 285 aaKnown RBP13.78□□□□□ -0.2
SKA3-203ENST00000400018 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
SKA3-203ENST00000400018 MCM5P33992 734 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 RRP1BQ14684 758 aaKnown RBP13.78□□□□□ -0.2
SKA3-203ENST00000400018 DLGAP5Q15398 846 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 TM6SF1Q9BZW5 370 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 MKNK2Q9HBH9 465 aa13.78□□□□□ -0.2
SKA3-203ENST00000400018 ATP2B2Q01814 1243 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 ALX1Q15699 326 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 FAM173BQ6P4H8 233 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 PHKBQ93100 1093 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 ATP8A2Q9NTI2 1148 aa13.77□□□□□ -0.2
SKA3-203ENST00000400018 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 TSPY2A6NKD2 308 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 GOLGA8BA8MQT2 603 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 CDC27P30260 824 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 TNKSO95271 1327 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 CTDNEP1O95476 244 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 PDIA3P30101 505 aaKnown RBP13.77□□□□□ -0.21
SKA3-203ENST00000400018 CDK8P49336 464 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 KRT32Q14532 448 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 OSBPL5Q9H0X9 879 aaPredicted RBP13.77□□□□□ -0.21
SKA3-203ENST00000400018 LY9Q9HBG7 655 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
SKA3-203ENST00000400018 CEP350Q5VT06 3117 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 BRCA2P51587 3418 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
SKA3-203ENST00000400018 AKR1B1P15121 316 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
SKA3-203ENST00000400018 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
SKA3-203ENST00000400018 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
SKA3-203ENST00000400018 HPS5Q9UPZ3 1129 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 FZD9O00144 591 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 GJB2P29033 226 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
SKA3-203ENST00000400018 HHIPL2Q6UWX4 724 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 ZNF70Q9UC06 446 aaPredicted RBP13.76□□□□□ -0.21
SKA3-203ENST00000400018 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
SKA3-203ENST00000400018 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
SKA3-203ENST00000400018 LMNB1P20700 586 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 DGKZQ13574 1117 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 GSE1Q14687 1217 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 VEGFAP15692 232 aaPredicted RBP13.75□□□□□ -0.21
SKA3-203ENST00000400018 RASA1P20936 1047 aa13.75□□□□□ -0.21
SKA3-203ENST00000400018 MYH1P12882 1939 aa13.74□□□□□ -0.21
SKA3-203ENST00000400018 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
SKA3-203ENST00000400018 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
SKA3-203ENST00000400018 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
SKA3-203ENST00000400018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
SKA3-203ENST00000400018 MAST2Q6P0Q8 1798 aa13.74□□□□□ -0.21
SKA3-203ENST00000400018 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
SKA3-203ENST00000400018 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms