RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ALAS1P13196 640 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 UBE4AQ14139 1066 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 TFDP1Q14186 410 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 MAP9Q49MG5 647 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 GABPB2Q8TAK5 448 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 KIAA1524Q8TCG1 905 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 NRBP2Q9NSY0 501 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 ZNF215Q9UL58 517 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 VAMP4O75379 141 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 ARHGEF25Q86VW2 580 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 RASAL2Q9UJF2 1139 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 ARHGAP31Q2M1Z3 1444 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 AFMP43652 599 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 AKNAD1Q5T1N1 836 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 PODXL2Q9NZ53 605 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 CCND2P30279 289 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 MIER3Q7Z3K6 550 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 PHACTR3Q96KR7 559 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 CCDC17Q96LX7 622 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 JPH2Q9BR39 696 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 ARHGEF37A1IGU5 675 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 EEF2P13639 858 aaKnown RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 KRT5P13647 590 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 ZNF771Q7L3S4 317 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 TSHZ2Q9NRE2 1034 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 TESPA1A2RU30 521 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 KIF11P52732 1056 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 PRPF4BQ13523 1007 aaKnown RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 GRAPQ13588 217 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 VPS72Q15906 364 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 DEPTORQ8TB45 409 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 GRAPLQ8TC17 118 aaPredicted RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 RPS6KC1Q96S38 1066 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 RIOK1Q9BRS2 568 aaKnown RBP8.94□□□□□ -0.98
USP47-203ENST00000399455 CCPG1Q9ULG6 757 aa8.94□□□□□ -0.98
USP47-203ENST00000399455 RPS6KA4O75676 772 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 STK10O94804 968 aaKnown RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 DYDC1Q8WWB3 177 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 ZKSCAN3Q9BRR0 538 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 ZNF532Q9HCE3 1301 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 GPAA1O43292 621 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 DHX36Q9H2U1 1008 aaKnown RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 INCENPQ9NQS7 918 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 FSD2A1L4K1 749 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 CAVIN2O95810 425 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 IFFO1Q0D2I5 559 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 CFAP58Q5T655 872 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 CREB3L3Q68CJ9 461 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 GCNAQ96QF7 691 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 IWS1Q96ST2 819 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 COA1Q9GZY4 146 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 ATP8A2Q9NTI2 1148 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 KDM3AQ9Y4C1 1321 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 CRB1P82279 1406 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 SELENOOQ9BVL4 669 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 DNM3Q9UQ16 869 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 CLRN2A0PK11 232 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 XPOTO43592 962 aaKnown RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 UQCRHP07919 91 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 PCP11498 1178 aaKnown RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 ZSCAN20P17040 1043 aaPredicted RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 PROCA1Q8NCQ7 364 aaPredicted RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
USP47-203ENST00000399455 SUCLG2Q96I99 432 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 MED10Q9BTT4 135 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 RABGAP1Q9Y3P9 1069 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 AATKQ6ZMQ8 1374 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 ROBO2Q9HCK4 1378 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 RAD17O75943 681 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 PANK2Q9BZ23 570 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 DBNDD1Q9H9R9 158 aa8.93□□□□□ -0.98
USP47-203ENST00000399455 DAPK3O43293 454 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CNNM4Q6P4Q7 775 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 SLFN12Q8IYM2 578 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 RNF169Q8NCN4 708 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 LRRC2Q9BYS8 371 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 USP19O94966 1318 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 GOLGA6L9A6NEM1 432 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 GSDMDP57764 484 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CALCRLQ16602 461 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 LIN9Q5TKA1 542 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CCDC155Q8N6L0 562 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 GTF3C6Q969F1 213 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 ASAP1Q9ULH1 1129 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 RNF123Q5XPI4 1314 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 GAS7O60861 476 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 ARL1P40616 181 aaPredicted RBP8.92□□□□□ -0.98
USP47-203ENST00000399455 PPARAQ07869 468 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 NONOQ15233 471 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP47-203ENST00000399455 MIS18BP1Q6P0N0 1132 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CLEC4GQ6UXB4 293 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 NEK11Q8NG66 645 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 C21orf2O43822 256 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 BCAMP50895 628 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms