RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
SRMP1-201ENST00000398959 CCL5P13501 91 aa13.67□□□□□ -0.22
SRMP1-201ENST00000398959 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
SRMP1-201ENST00000398959 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
SRMP1-201ENST00000398959 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
SRMP1-201ENST00000398959 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
SRMP1-201ENST00000398959 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
SRMP1-201ENST00000398959 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 TNNI3KQ59H18 835 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
SRMP1-201ENST00000398959 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
SRMP1-201ENST00000398959 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 FPGT-TNNI3KV9GXZ4 949 aa13.66□□□□□ -0.22
SRMP1-201ENST00000398959 NAV1Q8NEY1 1877 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 TNPO2O14787 897 aaKnown RBP13.65□□□□□ -0.22
SRMP1-201ENST00000398959 ADCY3O60266 1144 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 BAG3O95817 575 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 PLCG2P16885 1265 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 POLA2Q14181 598 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 TREML2Q5T2D2 321 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
SRMP1-201ENST00000398959 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
SRMP1-201ENST00000398959 SHISA4Q96DD7 197 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
SRMP1-201ENST00000398959 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRMP1-201ENST00000398959 HERC5Q9UII4 1024 aaKnown RBP13.65□□□□□ -0.22
SRMP1-201ENST00000398959 SURF6O75683 361 aaKnown RBP13.64□□□□□ -0.23
SRMP1-201ENST00000398959 GJB1P08034 283 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 CAP2P40123 477 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 GJA8P48165 433 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 FLT3LGP49771 235 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 HMGCS2P54868 508 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 ATP8B2P98198 1209 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 SPP2Q13103 211 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRMP1-201ENST00000398959 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 DPF3Q92784 378 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 COA7Q96BR5 231 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 AS3MTQ9HBK9 375 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
SRMP1-201ENST00000398959 MYH7P12883 1935 aa13.63□□□□□ -0.23
SRMP1-201ENST00000398959 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
SRMP1-201ENST00000398959 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
SRMP1-201ENST00000398959 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
SRMP1-201ENST00000398959 TRIM34Q9BYJ4 488 aa13.63□□□□□ -0.23
SRMP1-201ENST00000398959 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
SRMP1-201ENST00000398959 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
SRMP1-201ENST00000398959 H0YGN5 161 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
SRMP1-201ENST00000398959 ELNP15502 786 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 FAM110CQ1W6H9 321 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
SRMP1-201ENST00000398959 PXYLP1Q8TE99 480 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
SRMP1-201ENST00000398959 HTATIP2Q9BUP3 242 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
SRMP1-201ENST00000398959 FLT1P17948 1338 aa13.62□□□□□ -0.23
SRMP1-201ENST00000398959 INHAP05111 366 aa13.61□□□□□ -0.23
SRMP1-201ENST00000398959 ZAP70P43403 619 aa13.61□□□□□ -0.23
SRMP1-201ENST00000398959 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
SRMP1-201ENST00000398959 IRF5Q13568 498 aa13.61□□□□□ -0.23
SRMP1-201ENST00000398959 RRP1BQ14684 758 aaKnown RBP13.61□□□□□ -0.23
SRMP1-201ENST00000398959 ADGRA1Q86SQ6 560 aa13.61□□□□□ -0.23
SRMP1-201ENST00000398959 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
SRMP1-201ENST00000398959 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
SRMP1-201ENST00000398959 FARP2O94887 1054 aaPredicted RBP13.6□□□□□ -0.23
SRMP1-201ENST00000398959 SGPL1O95470 568 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 ASNSP08243 561 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 PPP4CP60510 307 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 MTMR2Q13614 643 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 ZNF512BQ96KM6 892 aaPredicted RBP13.6□□□□□ -0.23
SRMP1-201ENST00000398959 CCDC8Q9H0W5 538 aaPredicted RBP13.6□□□□□ -0.23
SRMP1-201ENST00000398959 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
SRMP1-201ENST00000398959 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 DBNLQ9UJU6 430 aaKnown RBP13.6□□□□□ -0.23
SRMP1-201ENST00000398959 PALD1Q9ULE6 856 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
SRMP1-201ENST00000398959 BAZ2AQ9UIF9 1905 aaKnown RBP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 IGSF3O75054 1194 aa13.59□□□□□ -0.23
SRMP1-201ENST00000398959 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
SRMP1-201ENST00000398959 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 BACE1P56817 501 aa13.59□□□□□ -0.23
SRMP1-201ENST00000398959 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
SRMP1-201ENST00000398959 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
SRMP1-201ENST00000398959 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms