RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 KCNF1Q9H3M0 494 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 CYP4F12Q9HCS2 524 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 NPHS2Q9NP85 383 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 FANCLQ9NW38 375 aa4.34□□□□□ -1.71
RPS4XP3-201ENST00000398541 KLF4O43474 513 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 PPFIA4O75335 1185 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 TIAF1O95411 115 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 SSTR4P31391 388 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 ST13P50502 369 aaKnown RBP4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 RAB33AQ14088 237 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 EXOSC6Q5RKV6 272 aaKnown RBP4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 ANKS3Q6ZW76 656 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 KIAA0907Q7Z7F0 614 aaPredicted RBP4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 ZDHHC13Q8IUH4 622 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 TEX2Q8IWB9 1127 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 SMG8Q8ND04 991 aaKnown RBP4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 RELTQ969Z4 430 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 CCDC74AQ96AQ1 378 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 C8orf48Q96LL4 319 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 DBNDD2Q9BQY9 259 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 TRIM55Q9BYV6 548 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 NRSN2Q9GZP1 204 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 DNAJC25Q9H1X3 360 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 C12orf49Q9H741 205 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 SUGCTQ9HAC7 445 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 TTF2Q9UNY4 1162 aaKnown RBP4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 HIF3AQ9Y2N7 669 aa4.33□□□□□ -1.72
RPS4XP3-201ENST00000398541 GIPC1O14908 333 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 TGFB1P01137 390 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 DRD2P14416 443 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 MAOBP27338 520 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 MAP4P27816 1152 aaKnown RBP4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 CD97P48960 835 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 TAF1CQ15572 869 aaPredicted RBP4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 C4orf46Q504U0 113 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 SGO2Q562F6 1265 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 MEI1Q5TIA1 1274 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 TSHZ1Q6ZSZ6 1077 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 SH3TC2Q8TF17 1288 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 APPBP2Q92624 585 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 EVI5LQ96CN4 794 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 SGSM3Q96HU1 749 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 PCMTD2Q9NV79 361 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 STRIP2Q9ULQ0 834 aa4.32□□□□□ -1.72
RPS4XP3-201ENST00000398541 FAM221BA6H8Z2 402 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 COBLO75128 1261 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 GADD45BO75293 160 aaPredicted RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 B3GALT4O96024 378 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 CYP11A1P05108 521 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 CENPBP07199 599 aaPredicted RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 VIL1P09327 827 aaKnown RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 ITPKAP23677 461 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 RXRBP28702 533 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 NASPP49321 788 aaPredicted RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 USP11P51784 963 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 CHMP4BP1P59074 171 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 BIRC2Q13490 618 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 POU4F3Q15319 338 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 CCSAPQ6IQ19 270 aaPredicted RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 FERMT3Q86UX7 667 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 HOMER1Q86YM7 354 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 SHKBP1Q8TBC3 707 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 DDX54Q8TDD1 881 aaKnown RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 HNRNPLLQ8WVV9 542 aaKnown RBP4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 RPS6KC1Q96S38 1066 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 CEP89Q96ST8 783 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 IER2Q9BTL4 223 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 ZNF576Q9H609 170 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 ABCB6Q9NP58 842 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 COPRSQ9NQ92 184 aa4.31□□□□□ -1.72
RPS4XP3-201ENST00000398541 MED26O95402 600 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 CTSBP07858 339 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 ETFBP38117 255 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 GYS2P54840 703 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 SOX4Q06945 474 aaPredicted RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 PRPF40BQ6NWY9 871 aaKnown RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 KIAA0825Q8IV33 1275 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 C2CD4AQ8NCU7 369 aaPredicted RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 FBLIM1Q8WUP2 373 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 MFSD14AQ96MC6 490 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 FEZ1Q99689 392 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 CORO1BQ9BR76 489 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 TRIM56Q9BRZ2 755 aaKnown RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 SPON2Q9BUD6 331 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 KANSL2Q9H9L4 492 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 ZFYVE1Q9HBF4 777 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 HOMER2Q9NSB8 354 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 TMEM260Q9NX78 707 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 TERF2IPQ9NYB0 399 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 FAM8A1Q9UBU6 413 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 TRAK1Q9UPV9 953 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 THRAP3Q9Y2W1 955 aaKnown RBP4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 EID1Q9Y6B2 187 aa4.3□□□□□ -1.72
RPS4XP3-201ENST00000398541 TMEM238LA0A1B0GVL6 79 aa4.29□□□□□ -1.72
RPS4XP3-201ENST00000398541 FAM95CA0A1B0GW59 222 aa4.29□□□□□ -1.72
RPS4XP3-201ENST00000398541 ESYT3A0FGR9 886 aa4.29□□□□□ -1.72
RPS4XP3-201ENST00000398541 PRR19A6NJB7 356 aa4.29□□□□□ -1.72
RPS4XP3-201ENST00000398541 WDR64B1ANS9 1081 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms