RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 C3orf58Q8NDZ4 430 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PARD3BQ8TEW8 1205 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 YTHDC1Q96MU7 727 aaKnown RBP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 RIC8AQ9NPQ8 531 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 SCHIP1Q9P0W5 487 aaPredicted RBP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PGAP2Q9UHJ9 254 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PHTF1Q9UMS5 762 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PCDHGB3Q9Y5G1 929 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 TNIKQ9UKE5 1360 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 GOLIM4O00461 696 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 ADCY3O60266 1144 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 DDAH1O94760 285 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 ECE1P42892 770 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 DGKZQ13574 1117 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 KRT72Q14CN4 511 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 SEZ6Q53EL9 994 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 LRRTM3Q86VH5 581 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 CENPOQ9BU64 300 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
SMCO1-201ENST00000397537 DNAJC25-GNG10A0A024R161 153 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 INHAP05111 366 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 CPEP16870 476 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 DDIT3P35638 169 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 GRM3Q14832 879 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 RNF219Q5W0B1 726 aaPredicted RBP8.15□□□□□ -1.1
SMCO1-201ENST00000397537 XRRA1Q6P2D8 792 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 CNNM4Q6P4Q7 775 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 NKAPQ8N5F7 415 aaKnown RBP8.15□□□□□ -1.1
SMCO1-201ENST00000397537 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
SMCO1-201ENST00000397537 SLC4A9Q96Q91 983 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 ISY1Q9ULR0 285 aaKnown RBP8.15□□□□□ -1.1
SMCO1-201ENST00000397537 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.1
SMCO1-201ENST00000397537 GSTT1P30711 240 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 HSPA1LP34931 641 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 NUCB1Q02818 461 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 STAT4Q14765 748 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 C11orf91Q3C1V1 193 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 SPECC1Q5M775 1068 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 PPP4R3BQ5MIZ7 849 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 FBXW10Q5XX13 1052 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 C6orf15Q6UXA7 325 aaPredicted RBP8.15□□□□□ -1.11
SMCO1-201ENST00000397537 LEO1Q8WVC0 666 aaPredicted RBP8.15□□□□□ -1.11
SMCO1-201ENST00000397537 NELL1Q92832 810 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 IFT43Q96FT9 208 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 NELL2Q99435 816 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 CSRNP2Q9H175 543 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 NCOA5Q9HCD5 579 aaKnown RBP8.15□□□□□ -1.11
SMCO1-201ENST00000397537 FAM13BQ9NYF5 915 aa8.15□□□□□ -1.11
SMCO1-201ENST00000397537 WRNQ14191 1432 aaPredicted RBP eCLIP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 WDR7Q9Y4E6 1490 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 ZCCHC11Q5TAX3 1644 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 HOXB1P14653 301 aaPredicted RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 EIF5P55010 431 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 PSMA6P60900 246 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 GRM2Q14416 872 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 GBX1Q14549 363 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 CTC1Q2NKJ3 1217 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 POTEAQ6S8J7 498 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 IGF2-ASQ6U949 168 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 MSL3Q8N5Y2 521 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 KIFC2Q96AC6 838 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 CRBNQ96SW2 442 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 KIF2CQ99661 725 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
SMCO1-201ENST00000397537 KMT5AQ9NQR1 393 aa8.14□□□□□ -1.11
SMCO1-201ENST00000397537 PMM2O15305 246 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SDSP20132 328 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 TAF11Q15544 211 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 FAM133BQ5BKY9 247 aaKnown RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 WDR45BQ5MNZ6 344 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 CHCHD4Q8N4Q1 142 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 CNTD1Q8N815 330 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 COG1Q8WTW3 980 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 THAP11Q96EK4 314 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SPATA9Q9BWV2 254 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ETNK1Q9HBU6 452 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ZFYVE28Q9HCC9 887 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 DMTF1Q9Y222 760 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 PREX1Q8TCU6 1659 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ABHD14A-ACY1A0A1B0GW23 586 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 MTA2O94776 668 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 CAMK2GQ13555 558 aaPredicted RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ELF2Q15723 593 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 LONRF2Q1L5Z9 754 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms