RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 KIF1AQ12756 1690 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 TJP1Q07157 1748 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 NOM1Q5C9Z4 860 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 IARSP41252 1262 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 TRIM29Q14134 588 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 CCDC102BQ68D86 513 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 MYO5AQ9Y4I1 1855 aaKnown RBP27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 BTBD18B2RXH4 712 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 PIH1D3Q9NQM4 214 aaKnown RBP27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 NFE2L3Q9Y4A8 694 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 UBN2Q6ZU65 1347 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 CPDO75976 1380 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 A0A0U1RQJ8 604 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 SH2B2O14492 632 aaPredicted RBP27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 ZBTB43O43298 467 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 CIAO1O76071 339 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 ZFYP08048 801 aaPredicted RBP27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 RESP18Q5W5W9 173 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 HELBQ8NG08 1087 aaPredicted RBP27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 ATRIPQ8WXE1 791 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 FAN1Q9Y2M0 1017 aa27.36■■□□□ 1.97
CSNK1E-203ENST00000396832 SNAP23O00161 211 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 IFIT5Q13325 482 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 PNKPQ96T60 521 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 SUGCTQ9HAC7 445 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 LZTFL1Q9NQ48 299 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 WWC3Q9ULE0 1092 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 KAT6BQ8WYB5 2073 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 POLR2DO15514 142 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 TMEM67Q5HYA8 995 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 FBXL16Q8N461 479 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 CPLX3Q8WVH0 158 aa27.35■■□□□ 1.97
CSNK1E-203ENST00000396832 TRPM3Q9HCF6 1732 aaPredicted RBP27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 COBLO75128 1261 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 EIF3JO75822 258 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 GTF2A1P52655 376 aaPredicted RBP27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 WWC2Q6AWC2 1192 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 SAMSN1Q9NSI8 373 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 AKAP2Q9Y2D5 859 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 C4AP0C0L4 1744 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 C4BP0C0L5 1744 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 USP5P45974 858 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 KLHL10Q6JEL2 608 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 LDHAL6AQ6ZMR3 332 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 ABCB6Q9NP58 842 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 L1RE1Q9UN81 338 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 ZNF532Q9HCE3 1301 aa27.34■■□□□ 1.97
CSNK1E-203ENST00000396832 CASP1P29466 404 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 ICE2Q659A1 982 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 RAB21Q9UL25 225 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 USP49Q70CQ1 688 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 SEC31BQ9NQW1 1179 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 SERTAD1Q9UHV2 236 aa27.33■■□□□ 1.97
CSNK1E-203ENST00000396832 ERLIN1O75477 346 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 RPS6KA5O75582 802 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 CCDC175P0C221 793 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 MAGEA9P43362 315 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 NR5A1Q13285 461 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 GREM2Q9H772 168 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 MAN1B1Q9UKM7 699 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 CEP112Q8N8E3 955 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 CNNM1Q9NRU3 951 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 GLI3P10071 1580 aa27.32■■□□□ 1.96
CSNK1E-203ENST00000396832 POTEB2H3BUK9 544 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 PPP6R2O75170 966 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 STX17P56962 302 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 CPLX2Q6PUV4 134 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 CDC23Q9UJX2 597 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 TFRCP02786 760 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 ADD2P35612 726 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 SOWAHDA6NJG2 315 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 MSANTD4Q8NCY6 345 aa27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.31■■□□□ 1.963e-7■■■□□ 15.9
CSNK1E-203ENST00000396832 FAM217BQ9NTX9 383 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-203ENST00000396832 EIF3CLB5ME19 914 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 IFIT3O14879 490 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 CDKL5O76039 1030 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 PHKA1P46020 1223 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 TTC31Q49AM3 519 aaPredicted RBP27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 TOM1L2Q6ZVM7 507 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 PACS2Q86VP3 889 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 EIF3CQ99613 913 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 POSTNQ15063 836 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 KRI1Q8N9T8 703 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 LY9Q9HBG7 655 aa27.3■■□□□ 1.96
CSNK1E-203ENST00000396832 ITGA6P23229 1130 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 NTRK3Q16288 839 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 MSL3Q8N5Y2 521 aaKnown RBP27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 hCG_1642624A0A1W2PR95 340 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 PHACTR2O75167 634 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 DIS3L2Q8IYB7 885 aaKnown RBP27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 CCDC102AQ96A19 550 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 AIDAQ96BJ3 306 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 PCDHB6Q9Y5E3 794 aa27.29■■□□□ 1.96
CSNK1E-203ENST00000396832 SLC12A7Q9Y666 1083 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms