RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TFCP2Q12800 502 aa21.6■■□□□ 1.05
EXOSC3-202ENST00000396521 ANKRD13CQ8N6S4 541 aa21.6■■□□□ 1.05
EXOSC3-202ENST00000396521 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
EXOSC3-202ENST00000396521 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
EXOSC3-202ENST00000396521 AS3MTQ9HBK9 375 aa21.6■■□□□ 1.05
EXOSC3-202ENST00000396521 USP17L5A8MUK1 530 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 CAP2P40123 477 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 SPP2Q13103 211 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 NECAB2Q7Z6G3 386 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 NSUN4Q96CB9 384 aaKnown RBP21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 NEUROD6Q96NK8 337 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 DHX36Q9H2U1 1008 aaKnown RBP21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 HMG20BQ9P0W2 317 aa21.59■■□□□ 1.05
EXOSC3-202ENST00000396521 IPO8O15397 1037 aaKnown RBP21.58■■□□□ 1.05
EXOSC3-202ENST00000396521 UQCRFS1P1P0C7P4 283 aa21.58■■□□□ 1.05
EXOSC3-202ENST00000396521 SH3D19Q5HYK7 790 aa21.58■■□□□ 1.05
EXOSC3-202ENST00000396521 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.05
EXOSC3-202ENST00000396521 SZT2Q5T011 3432 aa21.58■■□□□ 1.04
EXOSC3-202ENST00000396521 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 BAG3O95817 575 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 HMGCRP04035 888 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 PLCG2P16885 1265 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 TREML2Q5T2D2 321 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 GINM1Q9NU53 330 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 PI4KBQ9UBF8 816 aa21.57■■□□□ 1.04
EXOSC3-202ENST00000396521 ARID4AP29374 1257 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-202ENST00000396521 RARSP54136 660 aaKnown RBP21.56■■□□□ 1.04
EXOSC3-202ENST00000396521 WDR18Q9BV38 432 aa21.56■■□□□ 1.04
EXOSC3-202ENST00000396521 RAI14Q9P0K7 980 aa21.56■■□□□ 1.04
EXOSC3-202ENST00000396521 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
EXOSC3-202ENST00000396521 RPTORQ8N122 1335 aa21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 ASNSP08243 561 aa21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 ASCC2Q9H1I8 757 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 LRP2BPQ9P2M1 347 aa21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 MORF4L1Q9UBU8 362 aa21.55■■□□□ 1.04
EXOSC3-202ENST00000396521 GNAI2P04899 355 aa21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 HMGCS2P54868 508 aa21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 FOXP4Q8IVH2 680 aaPredicted RBP21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 TEX11Q8IYF3 940 aa21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 TRMT44Q8IYL2 757 aaKnown RBP21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 PAWRQ96IZ0 340 aaKnown RBP21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 GJD2Q9UKL4 321 aa21.54■■□□□ 1.04
EXOSC3-202ENST00000396521 C19orf81C9J6K1 198 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 HOXA7P31268 230 aaPredicted RBP21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 BMP8BP34820 402 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 NBPF3Q9H094 633 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 TMOD4Q9NZQ9 345 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 MGAMO43451 1857 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 DOCK1Q14185 1865 aa21.53■■□□□ 1.04
EXOSC3-202ENST00000396521 SLURP2P0DP57 97 aa21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 XRCC5P13010 732 aaKnown RBP21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 BACE1P56817 501 aa21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 PPP4CP60510 307 aa21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 IRX3P78415 501 aaPredicted RBP21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 GPR153Q6NV75 609 aa21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 CCDC84Q86UT8 332 aaPredicted RBP21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 GTF3C2Q8WUA4 911 aaPredicted RBP21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 GPR108Q9NPR9 543 aa21.52■■□□□ 1.04
EXOSC3-202ENST00000396521 TBC1D9Q6ZT07 1266 aa21.51■■□□□ 1.03
EXOSC3-202ENST00000396521 SOCS4Q8WXH5 440 aa21.51■■□□□ 1.03
EXOSC3-202ENST00000396521 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.51■■□□□ 1.03
EXOSC3-202ENST00000396521 FAM196BA6NMK8 535 aa21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 CCDC158Q5M9N0 1113 aa21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 NAA16Q6N069 864 aaPredicted RBP21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 ATF7IPQ6VMQ6 1270 aa21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 METTL16Q86W50 562 aaKnown RBP21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 CERS3Q8IU89 383 aa21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 TRIM34Q9BYJ4 488 aa21.5■■□□□ 1.03
EXOSC3-202ENST00000396521 PTPRFP10586 1907 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 MAPK4P31152 587 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 MCAMP43121 646 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 PI16Q6UXB8 463 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 GPRC5AQ8NFJ5 357 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 NUDT12Q9BQG2 462 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 STAP2Q9UGK3 403 aa21.49■■□□□ 1.03
EXOSC3-202ENST00000396521 USP17L10C9JJH3 530 aa21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 SH3RF3Q8TEJ3 882 aaPredicted RBP21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 ZNF512BQ96KM6 892 aaPredicted RBP21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 GDF15Q99988 308 aa21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 OGDHLQ9ULD0 1010 aa21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 PHIPQ8WWQ0 1821 aa21.48■■□□□ 1.03
EXOSC3-202ENST00000396521 MTMR2Q13614 643 aa21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 PDE3AQ14432 1141 aa21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 MAP3K21Q5TCX8 1036 aa21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 TMED8Q6PL24 325 aaPredicted RBP21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 CRACR2BQ8N4Y2 399 aaPredicted RBP21.47■■□□□ 1.03
EXOSC3-202ENST00000396521 HERVK_113P62684 666 aa21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 RRP1BQ14684 758 aaKnown RBP21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 TTC39AQ5SRH9 613 aa21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 P2RX7Q99572 595 aaKnown RBP21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 C11orf49Q9H6J7 331 aa21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 AATFQ9NY61 560 aaKnown RBP eCLIP21.46■■□□□ 1.03
EXOSC3-202ENST00000396521 LAMA3Q16787 3333 aa21.45■■□□□ 1.02
EXOSC3-202ENST00000396521 HLA-DOAP06340 250 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms