RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CALM2P0DP24 149 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 CALM3P0DP25 149 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 MCM9Q9NXL9 1143 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 IFNKQ9P0W0 207 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 CYP2D7A0A087X1C5 515 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 NLRP5P59047 1200 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
PDXDC1-202ENST00000396410 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 KRT2P35908 639 aa13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 PNOCQ13519 176 aa13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 TRAPPC3LQ5T215 181 aa13.27□□□□□ -0.28
PDXDC1-202ENST00000396410 PAPPAQ13219 1627 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 MMP1P03956 469 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 PPP2R5BQ15173 497 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 MTERF4Q7Z6M4 381 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 HOMER1Q86YM7 354 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 SMARCE1Q969G3 411 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 USP21Q9UK80 565 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 LRP6O75581 1613 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 SF3B3Q15393 1217 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 CCDC112Q8NEF3 446 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 KCNF1Q9H3M0 494 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 KAT14Q9H8E8 782 aa13.27□□□□□ -0.29
PDXDC1-202ENST00000396410 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 ATRNO75882 1429 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 FAM84BQ96KN1 310 aaPredicted RBP13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 DHX8Q14562 1220 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 IQCB1Q15051 598 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 PTPN14Q15678 1187 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 FAM47AQ5JRC9 791 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 G3V3G9 751 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 CDC25BP30305 580 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 NARFQ9UHQ1 456 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
PDXDC1-202ENST00000396410 SEMA3EO15041 775 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 BAG3O95817 575 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 KIF5BP33176 963 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 POLR2DO15514 142 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 RPS6KA4O75676 772 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 UBASH3AP57075 661 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 NR5A1Q13285 461 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 UBE2Q2LH0YL09 131 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 DHX40Q8IX18 779 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 TMX4Q9H1E5 349 aaPredicted RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 MECOMQ03112 1051 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 SARM1Q6SZW1 724 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
PDXDC1-202ENST00000396410 MYL5Q02045 173 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 ITGB4P16144 1822 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 GSTO1P78417 241 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 ADGRA1Q86SQ6 560 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 LRRC8AQ8IWT6 810 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 XPO4Q9C0E2 1151 aaKnown RBP13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 LDHCP07864 332 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 DHX58Q96C10 678 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 BRIP1Q9BX63 1249 aa13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-202ENST00000396410 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.299e-7■■■□□ 17.9
PDXDC1-202ENST00000396410 AFMP43652 599 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 TXLNAP40222 546 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 NTRK3Q16288 839 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 KLHL10Q6JEL2 608 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-202ENST00000396410 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms