RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 KCNA3P22001 575 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 TNP2Q05952 138 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 KCNMA1Q12791 1236 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 DPYDQ12882 1025 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
LST1-212ENST00000396101 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
LST1-212ENST00000396101 ZMYND15Q9H091 742 aa13.86□□□□□ -0.19
LST1-212ENST00000396101 GPC6Q9Y625 555 aaPredicted RBP13.86□□□□□ -0.19
LST1-212ENST00000396101 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 COPS6Q7L5N1 327 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 LRP10Q7Z4F1 713 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 CHPF2Q9P2E5 772 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 ZNF232Q9UNY5 417 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
LST1-212ENST00000396101 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
LST1-212ENST00000396101 C10orf71Q711Q0 1435 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 MAPTP10636 758 aaKnown RBP13.84□□□□□ -0.19
LST1-212ENST00000396101 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
LST1-212ENST00000396101 PRR5LQ6MZQ0 368 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 ANKMY2Q8IV38 441 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 STAG2Q8N3U4 1231 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 XAGE3Q8WTP9 111 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
LST1-212ENST00000396101 MAP3K15Q6ZN16 1313 aa13.84□□□□□ -0.19
LST1-212ENST00000396101 DCDC2BA2VCK2 349 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 NPHP1O15259 732 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 EFSO43281 561 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 OIP5O43482 229 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 GPTP24298 496 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 YY1P25490 414 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 C1orf229Q6ZS94 237 aaPredicted RBP13.83□□□□□ -0.2
LST1-212ENST00000396101 NBPF5PQ86XG9 351 aaPredicted RBP13.83□□□□□ -0.2
LST1-212ENST00000396101 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
LST1-212ENST00000396101 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
LST1-212ENST00000396101 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 HOXB7P09629 217 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 C1orf53Q5VUE5 145 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 CNBD1Q8NA66 436 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 PIM2Q9P1W9 311 aa13.82□□□□□ -0.2
LST1-212ENST00000396101 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
LST1-212ENST00000396101 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
LST1-212ENST00000396101 BMP4P12644 408 aa13.81□□□□□ -0.2
LST1-212ENST00000396101 TPTE2Q6XPS3 522 aa13.81□□□□□ -0.2
LST1-212ENST00000396101 C2orf49Q9BVC5 232 aaPredicted RBP13.81□□□□□ -0.2
LST1-212ENST00000396101 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
LST1-212ENST00000396101 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
LST1-212ENST00000396101 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
LST1-212ENST00000396101 H0YIN7 160 aa13.8□□□□□ -0.2
LST1-212ENST00000396101 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
LST1-212ENST00000396101 DALRD3Q5D0E6 543 aaKnown RBP13.8□□□□□ -0.2
LST1-212ENST00000396101 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
LST1-212ENST00000396101 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
LST1-212ENST00000396101 IL16Q14005 1332 aa13.8□□□□□ -0.2
LST1-212ENST00000396101 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
LST1-212ENST00000396101 ZNF34Q8IZ26 560 aa13.79□□□□□ -0.2
LST1-212ENST00000396101 PHACTR1Q9C0D0 580 aa13.79□□□□□ -0.2
LST1-212ENST00000396101 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
LST1-212ENST00000396101 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
LST1-212ENST00000396101 GDF2Q9UK05 429 aaPredicted RBP13.79□□□□□ -0.2
LST1-212ENST00000396101 SHISA8B8ZZ34 492 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
LST1-212ENST00000396101 CD33P20138 364 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 PDE6BP35913 854 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 ST5P78524 1137 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 RHPN1Q8TCX5 695 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 SCG3Q8WXD2 468 aaKnown RBP13.78□□□□□ -0.2
LST1-212ENST00000396101 ZNF622Q969S3 477 aaKnown RBP eCLIP13.78□□□□□ -0.2
LST1-212ENST00000396101 ENAMQ9NRM1 1142 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 HCN4Q9Y3Q4 1203 aa13.78□□□□□ -0.2
LST1-212ENST00000396101 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
LST1-212ENST00000396101 AFDNP55196 1824 aaKnown RBP13.78□□□□□ -0.2
LST1-212ENST00000396101 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
LST1-212ENST00000396101 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
LST1-212ENST00000396101 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 LRRC69Q6ZNQ3 347 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 SLCO4C1Q6ZQN7 724 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 UBN2Q6ZU65 1347 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 GOLGA6L1Q8N7Z2 621 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 TTLL6Q8N841 843 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 FANCIQ9NVI1 1328 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 CHMP3Q9Y3E7 222 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
LST1-212ENST00000396101 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
LST1-212ENST00000396101 RNF225M0QZC1 329 aaPredicted RBP13.76□□□□□ -0.21
LST1-212ENST00000396101 ARAFP10398 606 aa13.76□□□□□ -0.21
LST1-212ENST00000396101 TCIRG1Q13488 830 aa13.76□□□□□ -0.21
LST1-212ENST00000396101 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
LST1-212ENST00000396101 PLBD2Q8NHP8 589 aa13.76□□□□□ -0.21
LST1-212ENST00000396101 LGR5O75473 907 aa13.75□□□□□ -0.21
LST1-212ENST00000396101 SRGNP10124 158 aa13.75□□□□□ -0.21
LST1-212ENST00000396101 IGFBP4P22692 258 aa13.75□□□□□ -0.21
LST1-212ENST00000396101 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms