RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 SEMA3EO15041 775 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 ERLIN1O75477 346 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
BDNF-204ENST00000395980 FECHP22830 423 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 FMR1Q06787 632 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-204ENST00000395980 SAFBQ15424 915 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-204ENST00000395980 ZSCAN26Q16670 478 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
BDNF-204ENST00000395980 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
BDNF-204ENST00000395980 ZBTB22O15209 634 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 IGDCC4Q8TDY8 1250 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 FOXP1Q9H334 677 aaPredicted RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 TIAM2Q8IVF5 1701 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 KIF5CO60282 957 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 IFNAR1P17181 557 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 ADKP55263 362 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 SCARF1Q14162 830 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 HDXQ7Z353 690 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 MMP1P03956 469 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 PHKBQ93100 1093 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 CTAGE1Q96RT6 745 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 EPC1Q9H2F5 836 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 MRPL44Q9H9J2 332 aaKnown RBP9.92□□□□□ -0.82
BDNF-204ENST00000395980 LY9Q9HBG7 655 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 ADAM21Q9UKJ8 722 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
BDNF-204ENST00000395980 PBX1P40424 430 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 RCAN1P53805 252 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 MICU3Q86XE3 530 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 RPS6KA5O75582 802 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 BEND6Q5SZJ8 279 aaPredicted RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 RASGRP2Q7LDG7 609 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 MTA3Q9BTC8 594 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 TTF2Q9UNY4 1162 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 SRPRBQ9Y5M8 271 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 ITIH6Q6UXX5 1313 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 FOXN1O15353 648 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 ACTN4O43707 911 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 SPATA1Q5VX52 437 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
BDNF-204ENST00000395980 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 CSF1RP07333 972 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 IVLP07476 585 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 ACTN2P35609 894 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 TMEM67Q5HYA8 995 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 NFXL1Q6ZNB6 911 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 DESI2Q9BSY9 194 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
BDNF-204ENST00000395980 H3BQF6 201 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 PCCAP05165 728 aaPredicted RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 TOB1P50616 345 aaPredicted RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 WHAMMP3Q1A5X7 153 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 CNGA4Q8IV77 575 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 MED15Q96RN5 788 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 CHD4Q14839 1912 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 MYO5AQ9Y4I1 1855 aaKnown RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 B4E1Z4 1266 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 DIS3L2Q8IYB7 885 aaKnown RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 SLC26A6Q9BXS9 759 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
BDNF-204ENST00000395980 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
BDNF-204ENST00000395980 MFAP3LO75121 409 aa9.9□□□□□ -0.83
BDNF-204ENST00000395980 MCAMP43121 646 aa9.9□□□□□ -0.83
BDNF-204ENST00000395980 TCIRG1Q13488 830 aa9.9□□□□□ -0.83
BDNF-204ENST00000395980 CDKAL1Q5VV42 579 aa9.9□□□□□ -0.83
BDNF-204ENST00000395980 SAMSN1Q9NSI8 373 aaKnown RBP9.9□□□□□ -0.83
BDNF-204ENST00000395980 L1RE1Q9UN81 338 aa9.9□□□□□ -0.83
BDNF-204ENST00000395980 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 BCL9LQ86UU0 1499 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 CTAGE9A4FU28 777 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 FILIP1LQ4L180 1135 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms