RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 UBASH3AP57075 661 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 PEAK1Q9H792 1746 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 SMIM24O75264 130 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 TADA3O75528 432 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 SNUPNO95149 360 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 STIM1Q13586 685 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 RRP12Q5JTH9 1297 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 ABCC4O15439 1325 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 LRRC31Q6UY01 552 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 NECAB1Q8N987 351 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 THOC1Q96FV9 657 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 TRIM4Q9C037 500 aa12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-202ENST00000395358 ANKRD18BA2A2Z9 1011 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 TUBBP07437 444 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 MFSD4BQ5TF39 518 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 NYAP1Q6ZVC0 841 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 H3BQF6 201 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 MYO1FO00160 1098 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 CASP8Q14790 479 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 CPLX3Q8WVH0 158 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 IMPACTQ9P2X3 320 aa12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 COL14A1Q05707 1796 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-202ENST00000395358 GCKRQ14397 625 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 PHLPP2Q6ZVD8 1323 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 STK38Q15208 465 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 IQUBQ8NA54 791 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 SASH3O75995 380 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 CDC25BP30305 580 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 ESYT1Q9BSJ8 1104 aa12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 TRPM3Q9HCF6 1732 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-202ENST00000395358 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 OPA1O60313 960 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 XPO4Q9C0E2 1151 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 CTAGE9A4FU28 777 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 N4BP1O75113 896 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 CYP19A1P11511 503 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 PPARDQ03181 441 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 KLC4Q9NSK0 619 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 NEURL1BA8MQ27 555 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 GIGYF2Q6Y7W6 1299 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 TPX2Q9ULW0 747 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-202ENST00000395358 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 SH2B1Q9NRF2 756 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 AK2P54819 239 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 TUBB4BP68371 445 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 IFT88Q13099 833 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 WHAMMP3Q1A5X7 153 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
RAPGEF3-202ENST00000395358 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms