RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CLRN2A0PK11 232 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 GJB2P29033 226 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 EVCP57679 992 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 SPDYE2Q495Y8 402 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-202ENST00000395354 NECAB1Q8N987 351 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 GTF3C6Q969F1 213 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 ZNF274Q96GC6 653 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-202ENST00000395354 EPB41L4AQ9HCS5 686 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-202ENST00000395354 SLC4A4Q9Y6R1 1079 aa22.69■■□□□ 1.22
LMNB1-202ENST00000395354 PRKAB2O43741 272 aa22.68■■□□□ 1.22
LMNB1-202ENST00000395354 PFKFB2O60825 505 aa22.68■■□□□ 1.22
LMNB1-202ENST00000395354 CACNB3P54284 484 aa22.68■■□□□ 1.22
LMNB1-202ENST00000395354 SKOR2Q2VWA4 1001 aaPredicted RBP22.68■■□□□ 1.22
LMNB1-202ENST00000395354 NBPF3Q9H094 633 aa22.68■■□□□ 1.22
LMNB1-202ENST00000395354 TMOD2Q9NZR1 351 aa22.68■■□□□ 1.22
LMNB1-202ENST00000395354 ASTN2O75129 1339 aaPredicted RBP22.68■■□□□ 1.22
LMNB1-202ENST00000395354 EAPPQ56P03 285 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-202ENST00000395354 LLPHQ9BRT6 129 aaKnown RBP22.67■■□□□ 1.22
LMNB1-202ENST00000395354 STX6O43752 255 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 WDHD1O75717 1129 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-202ENST00000395354 PDCP20941 246 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 GIMAP6Q6P9H5 292 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 TGFBRAP1Q8WUH2 860 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 SDR42E1Q8WUS8 393 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
LMNB1-202ENST00000395354 PRC1O43663 620 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 TRAK2O60296 914 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 SYT1P21579 422 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 USP5P45974 858 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 NFIAQ12857 509 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 ANGEL2Q5VTE6 544 aaKnown RBP22.66■■□□□ 1.22
LMNB1-202ENST00000395354 TBC1D10CQ8IV04 446 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 IDI2Q9BXS1 227 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 CNNM2Q9H8M5 875 aa22.66■■□□□ 1.22
LMNB1-202ENST00000395354 ZSCAN22P10073 491 aaPredicted RBP22.65■■□□□ 1.22
LMNB1-202ENST00000395354 YY1P25490 414 aa22.65■■□□□ 1.22
LMNB1-202ENST00000395354 TDO2P48775 406 aa22.65■■□□□ 1.22
LMNB1-202ENST00000395354 PICALMQ13492 652 aa22.65■■□□□ 1.22
LMNB1-202ENST00000395354 ZC3H15Q8WU90 426 aaKnown RBP22.65■■□□□ 1.22
LMNB1-202ENST00000395354 LRRC2Q9BYS8 371 aa22.65■■□□□ 1.22
LMNB1-202ENST00000395354 GPBP1L1Q9HC44 474 aaPredicted RBP22.65■■□□□ 1.22
LMNB1-202ENST00000395354 TCP10L2B9ZVM9 353 aa22.64■■□□□ 1.22
LMNB1-202ENST00000395354 FKBP1CQ5VVH2 108 aa22.64■■□□□ 1.22
LMNB1-202ENST00000395354 MAPKAPK5Q8IW41 473 aa22.64■■□□□ 1.22
LMNB1-202ENST00000395354 ATP8A2Q9NTI2 1148 aa22.64■■□□□ 1.22
LMNB1-202ENST00000395354 GGA3Q9NZ52 723 aa22.64■■□□□ 1.22
LMNB1-202ENST00000395354 APOBRQ0VD83 1088 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 STAG1Q8WVM7 1258 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 DDX4Q9NQI0 724 aaKnown RBP22.63■■□□□ 1.21
LMNB1-202ENST00000395354 FAM198AQ9UFP1 575 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 ANAPC4Q9UJX5 808 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 CLEC11AQ9Y240 323 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 ECM29Q5VYK3 1845 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 NPM3O75607 178 aaKnown RBP22.63■■□□□ 1.21
LMNB1-202ENST00000395354 ANTXR2P58335 489 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 TCP10Q12799 353 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 STK3Q13188 491 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 AKNAD1Q5T1N1 836 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 DCPSQ96C86 337 aaKnown RBP22.63■■□□□ 1.21
LMNB1-202ENST00000395354 TMEM87BQ96K49 555 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 KRT23Q9C075 422 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 RNF41Q9H4P4 317 aaPredicted RBP22.63■■□□□ 1.21
LMNB1-202ENST00000395354 DCP1AQ9NPI6 582 aaPredicted RBP22.63■■□□□ 1.21
LMNB1-202ENST00000395354 PGAP2Q9UHJ9 254 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 ATP6V1DQ9Y5K8 247 aa22.63■■□□□ 1.21
LMNB1-202ENST00000395354 FLT1P17948 1338 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 ENTPD3O75355 529 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 PDIA3P30101 505 aaKnown RBP22.62■■□□□ 1.21
LMNB1-202ENST00000395354 SCRN1Q12765 414 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 GSE1Q14687 1217 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 MCTP1Q6DN14 999 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 MTA3Q9BTC8 594 aa22.62■■□□□ 1.21
LMNB1-202ENST00000395354 MKRN1Q9UHC7 482 aaKnown RBP22.62■■□□□ 1.21
LMNB1-202ENST00000395354 SCAF8Q9UPN6 1271 aaKnown RBP22.62■■□□□ 1.21
LMNB1-202ENST00000395354 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
LMNB1-202ENST00000395354 POTEIP0CG38 1075 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 POTEJP0CG39 1038 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 TNNI2P48788 182 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 TNFAIP1Q13829 316 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 CHST3Q7LGC8 479 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 FAM83AQ86UY5 434 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 APOBEC3FQ8IUX4 373 aaKnown RBP22.61■■□□□ 1.21
LMNB1-202ENST00000395354 ZFPM1Q8IX07 1006 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 SMARCC2Q8TAQ2 1214 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 CDK5RAP2Q96SN8 1893 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 PITPNM2Q9BZ72 1349 aa22.61■■□□□ 1.21
LMNB1-202ENST00000395354 HMGN5P82970 282 aaKnown RBP22.6■■□□□ 1.21
LMNB1-202ENST00000395354 LARP1BQ659C4 914 aaKnown RBP22.6■■□□□ 1.21
LMNB1-202ENST00000395354 MFSD6Q6ZSS7 791 aa22.6■■□□□ 1.21
LMNB1-202ENST00000395354 FAM151AQ8WW52 585 aa22.6■■□□□ 1.21
LMNB1-202ENST00000395354 MCM9Q9NXL9 1143 aa22.6■■□□□ 1.21
LMNB1-202ENST00000395354 MTMR6Q9Y217 621 aa22.6■■□□□ 1.21
LMNB1-202ENST00000395354 F13A1P00488 732 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 PCP11498 1178 aaKnown RBP22.59■■□□□ 1.21
LMNB1-202ENST00000395354 PPARAQ07869 468 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 RASA3Q14644 834 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 OSBPL5Q9H0X9 879 aaPredicted RBP22.59■■□□□ 1.21
LMNB1-202ENST00000395354 DEFB129Q9H1M3 183 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 SAP30BPQ9UHR5 308 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms