RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 FGRP09769 529 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 CDC27P30260 824 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 ADD1P35611 737 aaKnown RBP23.04■■□□□ 1.28
RAB5C-202ENST00000393860 HMGN5P82970 282 aaKnown RBP23.04■■□□□ 1.28
RAB5C-202ENST00000393860 KIAA0825Q8IV33 1275 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 SUPT20HQ8NEM7 779 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 FLT1P17948 1338 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
RAB5C-202ENST00000393860 CPLX1O14810 134 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 POLR3DP05423 398 aaPredicted RBP23.04■■□□□ 1.28
RAB5C-202ENST00000393860 FDPSP14324 419 aaKnown RBP23.04■■□□□ 1.28
RAB5C-202ENST00000393860 PLCG2P16885 1265 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 DACT2Q5SW24 774 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 UPF1Q92900 1129 aaKnown RBP eCLIP23.04■■□□□ 1.282e-11■■■■■ 41.6
RAB5C-202ENST00000393860 TCHHQ07283 1943 aa23.04■■□□□ 1.28
RAB5C-202ENST00000393860 PLCD1P51178 756 aa23.03■■□□□ 1.28
RAB5C-202ENST00000393860 PICALMQ13492 652 aa23.03■■□□□ 1.28
RAB5C-202ENST00000393860 ZSCAN10Q96SZ4 725 aaPredicted RBP23.03■■□□□ 1.28
RAB5C-202ENST00000393860 CNPY2Q9Y2B0 182 aa23.03■■□□□ 1.28
RAB5C-202ENST00000393860 H3BQV1 296 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 ORC4O43929 436 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 NMT2O60551 498 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 PDE4BQ07343 736 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 SEC23AQ15436 765 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 IFFO2Q5TF58 517 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 STRIP1Q5VSL9 837 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 CERS3Q8IU89 383 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 AMOTL1Q8IY63 956 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 SLC44A5Q8NCS7 719 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 ZNF277Q9NRM2 450 aaPredicted RBP23.02■■□□□ 1.28
RAB5C-202ENST00000393860 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 MYH1P12882 1939 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 FOCADQ5VW36 1801 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 USP17L3A6NCW0 530 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 USP17L4A6NCW7 530 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 YDJCA8MPS7 323 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 DHX16O60231 1041 aaKnown RBP23.02■■□□□ 1.28
RAB5C-202ENST00000393860 PCP11498 1178 aaKnown RBP23.02■■□□□ 1.28
RAB5C-202ENST00000393860 PTMSP20962 102 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 GUCY1B3Q02153 619 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 FAM173BQ6P4H8 233 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 USP17L1Q7RTZ2 530 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 ENAHQ8N8S7 591 aaPredicted RBP23.02■■□□□ 1.28
RAB5C-202ENST00000393860 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
RAB5C-202ENST00000393860 NCLP19338 710 aaKnown RBP23.01■■□□□ 1.27
RAB5C-202ENST00000393860 TEKT1Q969V4 418 aa23.01■■□□□ 1.27
RAB5C-202ENST00000393860 CRKP46108 304 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 DNM1Q05193 864 aaKnown RBP23■■□□□ 1.27
RAB5C-202ENST00000393860 SYNE3Q6ZMZ3 975 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 RTKN2Q8IZC4 609 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 NUP133Q8WUM0 1156 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 CHMP4CQ96CF2 233 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 FAM217BQ9NTX9 383 aaPredicted RBP23■■□□□ 1.27
RAB5C-202ENST00000393860 USP40Q9NVE5 1235 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 ORC3Q9UBD5 711 aaPredicted RBP23■■□□□ 1.27
RAB5C-202ENST00000393860 COL4A5P29400 1685 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 IQCA1Q86XH1 822 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 ZNF654Q8IZM8 581 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 PHKBQ93100 1093 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 PIM2Q9P1W9 311 aa23■■□□□ 1.27
RAB5C-202ENST00000393860 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
RAB5C-202ENST00000393860 ECM29Q5VYK3 1845 aa22.99■■□□□ 1.27
RAB5C-202ENST00000393860 TSPY2A6NKD2 308 aa22.99■■□□□ 1.27
RAB5C-202ENST00000393860 MTA3Q9BTC8 594 aa22.99■■□□□ 1.27
RAB5C-202ENST00000393860 DDX4Q9NQI0 724 aaKnown RBP22.99■■□□□ 1.27
RAB5C-202ENST00000393860 DDX49Q9Y6V7 483 aaKnown RBP22.99■■□□□ 1.27
RAB5C-202ENST00000393860 TGFB2P61812 414 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
RAB5C-202ENST00000393860 OTUD7BQ6GQQ9 843 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 KIF3AQ9Y496 699 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 ATP6V1DQ9Y5K8 247 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 FIBPO43427 364 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 RBM5P52756 815 aaKnown RBP eCLIP22.98■■□□□ 1.27
RAB5C-202ENST00000393860 TPRNQ4KMQ1 711 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 APOBEC3HQ6NTF7 200 aaKnown RBP22.98■■□□□ 1.27
RAB5C-202ENST00000393860 CDC42EP5Q6NZY7 148 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 HHIPL2Q6UWX4 724 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 LARGE2Q8N3Y3 721 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 PSMD1Q99460 953 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 MKNK2Q9HBH9 465 aa22.98■■□□□ 1.27
RAB5C-202ENST00000393860 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
RAB5C-202ENST00000393860 TFAP4Q01664 338 aa22.97■■□□□ 1.27
RAB5C-202ENST00000393860 USP48Q86UV5 1035 aa22.97■■□□□ 1.27
RAB5C-202ENST00000393860 TMTC2Q8N394 836 aa22.97■■□□□ 1.27
RAB5C-202ENST00000393860 GJB4Q9NTQ9 266 aa22.97■■□□□ 1.27
RAB5C-202ENST00000393860 RESTQ13127 1097 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 GSE1Q14687 1217 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 RTN1Q16799 776 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 SKOR2Q2VWA4 1001 aaPredicted RBP22.96■■□□□ 1.27
RAB5C-202ENST00000393860 CMTR1Q8N1G2 835 aaKnown RBP22.96■■□□□ 1.27
RAB5C-202ENST00000393860 AIFM3Q96NN9 605 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 UBE2Q2LH0YL09 131 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 RAD17O75943 681 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 PDIA4P13667 645 aaKnown RBP22.96■■□□□ 1.27
RAB5C-202ENST00000393860 FKBP1AP62942 108 aaKnown RBP22.96■■□□□ 1.27
RAB5C-202ENST00000393860 NTRK3Q16288 839 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
RAB5C-202ENST00000393860 GPT2Q8TD30 523 aa22.96■■□□□ 1.27
RAB5C-202ENST00000393860 BRCA1P38398 1863 aaKnown RBP22.95■■□□□ 1.26
RAB5C-202ENST00000393860 GADD45BO75293 160 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms