RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 PROM2Q8N271 834 aa22.18■■□□□ 1.14
ERCC2-203ENST00000391944 ZSCAN10Q96SZ4 725 aaPredicted RBP22.18■■□□□ 1.14
ERCC2-203ENST00000391944 CTAGE5O15320 804 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 U2AF2P26368 475 aaKnown RBP eCLIP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 SBK1Q52WX2 424 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 TRIM22Q8IYM9 498 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 USP25Q9UHP3 1055 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 SPTLC2O15270 562 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 BBOX1O75936 387 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 LDHBP07195 334 aaKnown RBP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 HOXA10P31260 410 aaPredicted RBP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 TXNRD1Q16881 649 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 NBPF11Q86T75 865 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 CRACR2BQ8N4Y2 399 aaPredicted RBP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 ENAHQ8N8S7 591 aaPredicted RBP22.17■■□□□ 1.14
ERCC2-203ENST00000391944 FSIP1Q8NA03 581 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 FAM200AQ8TCP9 573 aa22.17■■□□□ 1.14
ERCC2-203ENST00000391944 ORC4O43929 436 aa22.16■■□□□ 1.14
ERCC2-203ENST00000391944 DDR1Q08345 913 aa22.16■■□□□ 1.14
ERCC2-203ENST00000391944 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
ERCC2-203ENST00000391944 ATP2B4P23634 1241 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 SASS6Q6UVJ0 657 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 IQCA1Q86XH1 822 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 MRPS27Q92552 414 aaKnown RBP22.15■■□□□ 1.14
ERCC2-203ENST00000391944 ARPP21Q9UBL0 812 aaPredicted RBP22.15■■□□□ 1.14
ERCC2-203ENST00000391944 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 UBE2Q2LH0YL09 131 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 NUP133Q8WUM0 1156 aa22.15■■□□□ 1.14
ERCC2-203ENST00000391944 KLRG2A4D1S0 409 aaPredicted RBP22.14■■□□□ 1.14
ERCC2-203ENST00000391944 KINO60870 393 aaKnown RBP22.14■■□□□ 1.14
ERCC2-203ENST00000391944 PRDM1O75626 825 aa22.14■■□□□ 1.14
ERCC2-203ENST00000391944 NOL7Q9UMY1 257 aaKnown RBP22.14■■□□□ 1.14
ERCC2-203ENST00000391944 DEXIO95424 95 aa22.14■■□□□ 1.13
ERCC2-203ENST00000391944 SLC3A2P08195 630 aaKnown RBP22.14■■□□□ 1.13
ERCC2-203ENST00000391944 GUCY1A2P33402 732 aa22.14■■□□□ 1.13
ERCC2-203ENST00000391944 GNL2Q13823 731 aaKnown RBP22.14■■□□□ 1.13
ERCC2-203ENST00000391944 SLC39A14Q15043 492 aa22.14■■□□□ 1.13
ERCC2-203ENST00000391944 FMR1NBQ8N0W7 255 aaPredicted RBP22.14■■□□□ 1.13
ERCC2-203ENST00000391944 CRAMP1Q96RY5 1269 aa22.14■■□□□ 1.13
ERCC2-203ENST00000391944 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.14■■□□□ 1.13
ERCC2-203ENST00000391944 LAMB1P07942 1786 aa22.14■■□□□ 1.13
ERCC2-203ENST00000391944 UFL1O94874 794 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 ADCY5O95622 1261 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 GSTO1P78417 241 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 ANO6Q4KMQ2 910 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 IFIT1BQ5T764 474 aaKnown RBP22.13■■□□□ 1.13
ERCC2-203ENST00000391944 GPR101Q96P66 508 aaPredicted RBP22.13■■□□□ 1.13
ERCC2-203ENST00000391944 GGA1Q9UJY5 639 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 CD209Q9NNX6 404 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 PODXL2Q9NZ53 605 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 DLEC1Q9Y238 1755 aa22.13■■□□□ 1.13
ERCC2-203ENST00000391944 CATIPQ7Z7H3 387 aa22.12■■□□□ 1.13
ERCC2-203ENST00000391944 MKRN1Q9UHC7 482 aaKnown RBP22.12■■□□□ 1.13
ERCC2-203ENST00000391944 MMP1P03956 469 aa22.12■■□□□ 1.13
ERCC2-203ENST00000391944 PPP4CP60510 307 aa22.12■■□□□ 1.13
ERCC2-203ENST00000391944 EVX2Q03828 476 aa22.12■■□□□ 1.13
ERCC2-203ENST00000391944 CCDC82Q8N4S0 544 aa22.12■■□□□ 1.13
ERCC2-203ENST00000391944 CAVIN2O95810 425 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 IL1R1P14778 569 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 AXDND1Q5T1B0 1012 aaPredicted RBP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CMTR1Q8N1G2 835 aaKnown RBP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 RNF26Q9BY78 433 aaPredicted RBP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 A0A1B0GVL5 298 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 LDHCP07864 332 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CALM1P0DP23 149 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CALM2P0DP24 149 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CALM3P0DP25 149 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CYP2D6P10635 497 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 MSNP26038 577 aaKnown RBP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 PDE4BQ07343 736 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 SAFBQ15424 915 aaKnown RBP eCLIP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 GRIK5Q16478 980 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
ERCC2-203ENST00000391944 CBX8Q9HC52 389 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 MCM9Q9NXL9 1143 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 TAOK2Q9UL54 1235 aa22.11■■□□□ 1.13
ERCC2-203ENST00000391944 BAG3O95817 575 aa22.1■■□□□ 1.13
ERCC2-203ENST00000391944 NDUFA8P51970 172 aa22.1■■□□□ 1.13
ERCC2-203ENST00000391944 TROAPQ12815 778 aa22.1■■□□□ 1.13
ERCC2-203ENST00000391944 MAP3K14Q99558 947 aa22.1■■□□□ 1.13
ERCC2-203ENST00000391944 PPP6R2O75170 966 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 CMA1P23946 247 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 PTPAQ15257 358 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 NOSTRINQ8IVI9 506 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 RBM28Q9NW13 759 aaKnown RBP22.09■■□□□ 1.13
ERCC2-203ENST00000391944 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.09■■□□□ 1.13
ERCC2-203ENST00000391944 AP5Z1O43299 807 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 NT5C2P49902 561 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 DIXDC1Q155Q3 683 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 TMC4Q7Z404 712 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 TBC1D16Q8TBP0 767 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 SH3RF3Q8TEJ3 882 aaPredicted RBP22.09■■□□□ 1.13
ERCC2-203ENST00000391944 FOXP1Q9H334 677 aaPredicted RBP22.09■■□□□ 1.13
ERCC2-203ENST00000391944 ZKSCAN5Q9Y2L8 839 aa22.09■■□□□ 1.13
ERCC2-203ENST00000391944 MYH6P13533 1939 aa22.08■■□□□ 1.13
ERCC2-203ENST00000391944 BTBD18B2RXH4 712 aa22.08■■□□□ 1.13
ERCC2-203ENST00000391944 PLSCR1O15162 318 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms