RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 USP48Q86UV5 1035 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 SLC44A5Q8NCS7 719 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 TBC1D32Q96NH3 1257 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 PGAP2Q9UHJ9 254 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
ERCC2-202ENST00000391942 COL2A1P02458 1487 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-202ENST00000391942 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
ERCC2-202ENST00000391942 STOX1Q6ZVD7 989 aa20.22■□□□□ 0.83
ERCC2-202ENST00000391942 TEPSINQ96N21 525 aa20.22■□□□□ 0.83
ERCC2-202ENST00000391942 PI4KBQ9UBF8 816 aa20.22■□□□□ 0.83
ERCC2-202ENST00000391942 E7EWF7 191 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 PRDM1O75626 825 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 SLC3A2P08195 630 aaKnown RBP20.21■□□□□ 0.83
ERCC2-202ENST00000391942 YY1P25490 414 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 RBM25P49756 843 aaKnown RBP20.21■□□□□ 0.83
ERCC2-202ENST00000391942 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 NBPF12Q5TAG4 269 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-202ENST00000391942 CRACR2BQ8N4Y2 399 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-202ENST00000391942 KCNB2Q92953 911 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 GLIS2Q9BZE0 524 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-202ENST00000391942 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
ERCC2-202ENST00000391942 NEDD4P46934 1319 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
ERCC2-202ENST00000391942 AKNAD1Q5T1N1 836 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 MFSD6Q6ZSS7 791 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 MIGA2Q7L4E1 593 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 ROBO3Q96MS0 1386 aa20.2■□□□□ 0.82
ERCC2-202ENST00000391942 C16orf86Q6ZW13 317 aa20.19■□□□□ 0.82
ERCC2-202ENST00000391942 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
ERCC2-202ENST00000391942 JAKMIP1Q96N16 626 aaKnown RBP20.19■□□□□ 0.82
ERCC2-202ENST00000391942 PPP2R3BQ9Y5P8 575 aa20.19■□□□□ 0.82
ERCC2-202ENST00000391942 CDK8P49336 464 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 PDE4BQ07343 736 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 COL9A3Q14050 684 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-202ENST00000391942 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 EHD4Q9H223 541 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 DNAJC18Q9H819 358 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 ANAPC15P60006 121 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 GABPAQ06546 454 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 FOXP4Q8IVH2 680 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-202ENST00000391942 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-202ENST00000391942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.18■□□□□ 0.82
ERCC2-202ENST00000391942 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
ERCC2-202ENST00000391942 B4E1Z4 1266 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 CPA1P15085 419 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 KRT32Q14532 448 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 CDCA5Q96FF9 252 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 KIF2CQ99661 725 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 FZD1Q9UP38 647 aa20.17■□□□□ 0.82
ERCC2-202ENST00000391942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERCC2-202ENST00000391942 MYH8P13535 1937 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 TRAF5O00463 557 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
ERCC2-202ENST00000391942 CASTP20810 708 aaKnown RBP20.16■□□□□ 0.82
ERCC2-202ENST00000391942 SHMT1P34896 483 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
ERCC2-202ENST00000391942 TRDNQ13061 729 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 RALYLQ86SE5 291 aaKnown RBP20.16■□□□□ 0.82
ERCC2-202ENST00000391942 NCOA7Q8NI08 942 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 NEK1Q96PY6 1258 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 SWAP70Q9UH65 585 aa20.16■□□□□ 0.82
ERCC2-202ENST00000391942 SSC5DA1L4H1 1573 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 KDM4AO75164 1064 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 RASA1P20936 1047 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 PRKG1Q13976 671 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 FAM47AQ5JRC9 791 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 METTL16Q86W50 562 aaKnown RBP20.15■□□□□ 0.82
ERCC2-202ENST00000391942 UPF3BQ9BZI7 483 aaKnown RBP20.15■□□□□ 0.82
ERCC2-202ENST00000391942 CNNM2Q9H8M5 875 aa20.15■□□□□ 0.82
ERCC2-202ENST00000391942 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
ERCC2-202ENST00000391942 KIF3CO14782 793 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 ORC4O43929 436 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 FGRP09769 529 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 SUPT20HL1Q3ZLR7 823 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 CHST3Q7LGC8 479 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
ERCC2-202ENST00000391942 KRT23Q9C075 422 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 ZNF287Q9HBT7 754 aa20.14■□□□□ 0.81
ERCC2-202ENST00000391942 PSMA5P28066 241 aa20.13■□□□□ 0.81
ERCC2-202ENST00000391942 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
ERCC2-202ENST00000391942 ZNF784Q8NCA9 323 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-202ENST00000391942 HOOK2Q96ED9 719 aa20.13■□□□□ 0.81
ERCC2-202ENST00000391942 TCEANC2Q96MN5 208 aa20.13■□□□□ 0.81
ERCC2-202ENST00000391942 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
ERCC2-202ENST00000391942 TBC1D12O60347 775 aa20.12■□□□□ 0.81
ERCC2-202ENST00000391942 GDF11O95390 407 aa20.12■□□□□ 0.81
ERCC2-202ENST00000391942 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
ERCC2-202ENST00000391942 RRP1BQ14684 758 aaKnown RBP20.12■□□□□ 0.81
ERCC2-202ENST00000391942 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
ERCC2-202ENST00000391942 DCAF15Q66K64 600 aa20.12■□□□□ 0.81
ERCC2-202ENST00000391942 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
ERCC2-202ENST00000391942 MB21D2Q8IYB1 491 aaPredicted RBP20.12■□□□□ 0.81
ERCC2-202ENST00000391942 ESR2Q92731 530 aa20.12■□□□□ 0.81
ERCC2-202ENST00000391942 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms