RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
TRAV20-201ENST00000390448 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 MYH2Q9UKX2 1941 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
TRAV20-201ENST00000390448 SGPL1O95470 568 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 INHAP05111 366 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 RHBDL3P58872 404 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 NAA16Q6N069 864 aaPredicted RBP11.06□□□□□ -0.64
TRAV20-201ENST00000390448 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 PROCA1Q8NCQ7 364 aaPredicted RBP11.06□□□□□ -0.64
TRAV20-201ENST00000390448 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 DEFB118Q96PH6 123 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.06□□□□□ -0.64
TRAV20-201ENST00000390448 ZSWIM8A7E2V4 1837 aa11.06□□□□□ -0.64
TRAV20-201ENST00000390448 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 EVI5O60447 810 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 TRIM27P14373 513 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 PLCG2P16885 1265 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 CAP2P40123 477 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 GCLCP48506 637 aaPredicted RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 HMGCS2P54868 508 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 IRF5Q13568 498 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 DHX36Q9H2U1 1008 aaKnown RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 TMOD4Q9NZQ9 345 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
TRAV20-201ENST00000390448 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
TRAV20-201ENST00000390448 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 CCER2I3L3R5 266 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 BCAR3O75815 825 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 CAPN2P17655 700 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
TRAV20-201ENST00000390448 MCAMP43121 646 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 IRX3P78415 501 aaPredicted RBP11.04□□□□□ -0.64
TRAV20-201ENST00000390448 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
TRAV20-201ENST00000390448 RANBP2P49792 3224 aaKnown RBP11.04□□□□□ -0.64
TRAV20-201ENST00000390448 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 DOCK2Q92608 1830 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 ASNSP08243 561 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 MAPKAPK5Q8IW41 473 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 FTSJ3Q8IY81 847 aaKnown RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 ZNF384Q8TF68 577 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
TRAV20-201ENST00000390448 ASCC2Q9H1I8 757 aaPredicted RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.03□□□□□ -0.64
TRAV20-201ENST00000390448 HLA-DOAP06340 250 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 MTMR2Q13614 643 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 TNNI3KQ59H18 835 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 NECAB2Q7Z6G3 386 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
TRAV20-201ENST00000390448 TMEM57Q8N5G2 664 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 FPGT-TNNI3KV9GXZ4 949 aa11.02□□□□□ -0.65
TRAV20-201ENST00000390448 HMGCRP04035 888 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 BACE1P56817 501 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
TRAV20-201ENST00000390448 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAV20-201ENST00000390448 HMX1Q9NP08 348 aaPredicted RBP11.01□□□□□ -0.65
TRAV20-201ENST00000390448 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 SAP30BPQ9UHR5 308 aaKnown RBP11.01□□□□□ -0.65
TRAV20-201ENST00000390448 PALD1Q9ULE6 856 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
TRAV20-201ENST00000390448 DOCK1Q14185 1865 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 C19orf81C9J6K1 198 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 USP17L10C9JJH3 530 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
TRAV20-201ENST00000390448 IDH1O75874 414 aaKnown RBP11□□□□□ -0.65
TRAV20-201ENST00000390448 GDF11O95390 407 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 CYP2B6P20813 491 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 CYP7A1P22680 504 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 USP5P45974 858 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 PPP4CP60510 307 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 ATP8B2P98198 1209 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 RRP1BQ14684 758 aaKnown RBP11□□□□□ -0.65
TRAV20-201ENST00000390448 SH3D19Q5HYK7 790 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 ITPRIPQ8IWB1 547 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 WDR18Q9BV38 432 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 C1orf115Q9H7X2 142 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 PAK6Q9NQU5 681 aaPredicted RBP11□□□□□ -0.65
TRAV20-201ENST00000390448 RPTORQ8N122 1335 aa11□□□□□ -0.65
TRAV20-201ENST00000390448 COL2A1P02458 1487 aaPredicted RBP11□□□□□ -0.65
TRAV20-201ENST00000390448 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
TRAV20-201ENST00000390448 ZAP70P43403 619 aa10.99□□□□□ -0.65
TRAV20-201ENST00000390448 P2RX7Q99572 595 aaKnown RBP10.99□□□□□ -0.65
TRAV20-201ENST00000390448 FEZ1Q99689 392 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms