RNA–Protein interactions for RNA: ENST00000383898.1

RNU6-1-201, Transcript of RNA, U6 small nuclear 1, humanhuman

BASIC

Gene RNU6-1, Length 107 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1-201ENST00000383898 MAP4P27816 1152 aaKnown RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 ERCC5P28715 1186 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 FAM160A1Q05DH4 1040 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 PTPN11Q06124 597 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 COL9A2Q14055 689 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 DOC2BQ14184 412 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 INPP5AQ14642 412 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 CWF19L2Q2TBE0 894 aaKnown RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 WIPI1Q5MNZ9 446 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 ZBTB37Q5TC79 503 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 FBXL19Q6PCT2 694 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 LRFN4Q6PJG9 635 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 BNC2Q6ZN30 1099 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 BEND4Q6ZU67 534 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 C12orf40Q86WS4 652 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 SMYD4Q8IYR2 804 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 GIMAP7Q8NHV1 300 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 PLPPR2Q96GM1 343 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 SSU72Q9NP77 194 aaKnown RBP4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 IGSF5Q9NSI5 407 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 FAM105AQ9NUU6 356 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 ADAMTS1Q9UHI8 967 aa4.53□□□□□ -1.68
RNU6-1-201ENST00000383898 F6X3S4 739 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 COBLO75128 1261 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 RACK1P63244 317 aaKnown RBP4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 APOBRQ0VD83 1088 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 GNL2Q13823 731 aaKnown RBP4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 MLECQ14165 292 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 TTLL4Q14679 1199 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 NFKBIBQ15653 356 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 ZNF394Q53GI3 561 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 SGO2Q562F6 1265 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 PPM1JQ5JR12 505 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 NKAPLQ5M9Q1 402 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 ARTNQ5T4W7 220 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 CDPF1Q6NVV7 123 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 REXO1Q8N1G1 1221 aaKnown RBP4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 FBLIM1Q8WUP2 373 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 NKD1Q969G9 470 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 CCSER2Q9H7U1 834 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 ZFP64Q9NPA5 681 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 ADAM30Q9UKF2 790 aa4.52□□□□□ -1.69
RNU6-1-201ENST00000383898 PRR36Q9H6K5 1346 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 NFICP08651 508 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 RAB6AP20340 208 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 CAP2P40123 477 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 ZNF165P49910 485 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 ETF1P62495 437 aaKnown RBP4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 RSPO4Q2I0M5 234 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 C9orf131Q5VYM1 1079 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 REC114Q7Z4M0 266 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 HID1Q8IV36 788 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 SLITRK4Q8IW52 837 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 SEMA6CQ9H3T2 930 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 PCDHGB7Q9Y5F8 929 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 CSADQ9Y600 493 aa4.51□□□□□ -1.69
RNU6-1-201ENST00000383898 PRAMEF27A3QJZ7 478 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 DYRK3O43781 588 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 ATE1O95260 518 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 CYP27A1Q02318 531 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 RAD51AP2Q09MP3 1159 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 CPSF6Q16630 551 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 TMEM201Q5SNT2 666 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 RNF43Q68DV7 783 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 SLC6A19Q695T7 634 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 VPS37DQ86XT2 251 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 RASGRP4Q8TDF6 673 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 ISL2Q96A47 359 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 EAF1Q96JC9 268 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 DBNDD2Q9BQY9 259 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 C7orf69Q9H7B7 122 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 DAGLAQ9Y4D2 1042 aa4.5□□□□□ -1.69
RNU6-1-201ENST00000383898 HMX2A2RU54 273 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 IGLV1-40P01703 118 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 PGRP06401 933 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 NEFMP07197 916 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 IMPDH2P12268 514 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 PLCG1P19174 1290 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 GRK4P32298 578 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 NTF4P34130 210 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 GJA8P48165 433 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 NFIAQ12857 509 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 PAK2Q13177 524 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 LRRFIP1Q32MZ4 808 aaKnown RBP4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 SEZ6Q53EL9 994 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 SEZ6L2Q6UXD5 910 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 MCATQ8IVS2 390 aaKnown RBP4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 GPRASP2Q96D09 838 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 SEC16BQ96JE7 1060 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 METTL22Q9BUU2 404 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 EHMT1Q9H9B1 1298 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 UBP1Q9NZI7 540 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 PRKAG2Q9UGJ0 569 aa4.49□□□□□ -1.69
RNU6-1-201ENST00000383898 INPP5FQ9Y2H2 1132 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms