RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 MIER1Q8N108 512 aa32.4■■■□□ 2.78
NPHP3-202ENST00000383282 NKX2-3Q8TAU0 364 aa32.4■■■□□ 2.78
NPHP3-202ENST00000383282 DBNDD2Q9BQY9 259 aa32.4■■■□□ 2.78
NPHP3-202ENST00000383282 TBC1D2Q9BYX2 928 aa32.4■■■□□ 2.78
NPHP3-202ENST00000383282 SNRKQ9NRH2 765 aa32.4■■■□□ 2.78
NPHP3-202ENST00000383282 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.4■■■□□ 2.78
NPHP3-202ENST00000383282 MTFR1Q15390 333 aa32.39■■■□□ 2.78
NPHP3-202ENST00000383282 CCDC84Q86UT8 332 aaPredicted RBP32.39■■■□□ 2.78
NPHP3-202ENST00000383282 C1orf115Q9H7X2 142 aa32.39■■■□□ 2.78
NPHP3-202ENST00000383282 HERC5Q9UII4 1024 aaKnown RBP32.39■■■□□ 2.78
NPHP3-202ENST00000383282 PNMA3Q9UL41 463 aa32.39■■■□□ 2.78
NPHP3-202ENST00000383282 SH3RF3Q8TEJ3 882 aaPredicted RBP32.38■■■□□ 2.77
NPHP3-202ENST00000383282 DHX36Q9H2U1 1008 aaKnown RBP32.38■■■□□ 2.77
NPHP3-202ENST00000383282 AATFQ9NY61 560 aaKnown RBP eCLIP32.38■■■□□ 2.77
NPHP3-202ENST00000383282 IGSF3O75054 1194 aa32.37■■■□□ 2.77
NPHP3-202ENST00000383282 PROCA1Q8NCQ7 364 aaPredicted RBP32.37■■■□□ 2.77
NPHP3-202ENST00000383282 SLAIN1Q8ND83 568 aa32.37■■■□□ 2.77
NPHP3-202ENST00000383282 CAP2P40123 477 aa32.36■■■□□ 2.77
NPHP3-202ENST00000383282 SPP2Q13103 211 aa32.36■■■□□ 2.77
NPHP3-202ENST00000383282 ZNF280CQ8ND82 737 aa32.36■■■□□ 2.77
NPHP3-202ENST00000383282 PI4KBQ9UBF8 816 aa32.36■■■□□ 2.77
NPHP3-202ENST00000383282 ZNF512BQ96KM6 892 aaPredicted RBP32.35■■■□□ 2.77
NPHP3-202ENST00000383282 TNPO2O14787 897 aaKnown RBP32.34■■■□□ 2.77
NPHP3-202ENST00000383282 PABPC4Q13310 644 aaKnown RBP eCLIP32.34■■■□□ 2.77
NPHP3-202ENST00000383282 HABP4Q5JVS0 413 aaKnown RBP32.34■■■□□ 2.77
NPHP3-202ENST00000383282 RNF208Q9H0X6 261 aa32.34■■■□□ 2.77
NPHP3-202ENST00000383282 AS3MTQ9HBK9 375 aa32.34■■■□□ 2.77
NPHP3-202ENST00000383282 GABRQQ9UN88 632 aa32.34■■■□□ 2.77
NPHP3-202ENST00000383282 NOP58Q9Y2X3 529 aaKnown RBP32.34■■■□□ 2.77
NPHP3-202ENST00000383282 USP17L5A8MUK1 530 aa32.33■■■□□ 2.77
NPHP3-202ENST00000383282 CYP2E1P05181 493 aaPredicted RBP32.33■■■□□ 2.77
NPHP3-202ENST00000383282 CCL5P13501 91 aa32.33■■■□□ 2.77
NPHP3-202ENST00000383282 PPP4CP60510 307 aa32.33■■■□□ 2.77
NPHP3-202ENST00000383282 TREML2Q5T2D2 321 aa32.33■■■□□ 2.77
NPHP3-202ENST00000383282 ZBTB7BO15156 539 aaPredicted RBP32.32■■■□□ 2.76
NPHP3-202ENST00000383282 GJB1P08034 283 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 ANKRD13CQ8N6S4 541 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 TGFBRAP1Q8WUH2 860 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 TRIM34Q9BYJ4 488 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 PHIPQ8WWQ0 1821 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 PTPRFP10586 1907 aa32.32■■■□□ 2.76
NPHP3-202ENST00000383282 ZAP70P43403 619 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 GJA8P48165 433 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 FLT3LGP49771 235 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 HMGCS2P54868 508 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 FAM110CQ1W6H9 321 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 SHISA4Q96DD7 197 aa32.31■■■□□ 2.76
NPHP3-202ENST00000383282 ADCY3O60266 1144 aa32.3■■■□□ 2.76
NPHP3-202ENST00000383282 MAPKAPK5Q8IW41 473 aa32.3■■■□□ 2.76
NPHP3-202ENST00000383282 COA7Q96BR5 231 aa32.3■■■□□ 2.76
NPHP3-202ENST00000383282 DBNLQ9UJU6 430 aaKnown RBP32.3■■■□□ 2.76
NPHP3-202ENST00000383282 MAST2Q6P0Q8 1798 aa32.3■■■□□ 2.76
NPHP3-202ENST00000383282 RLBP1P12271 317 aa32.29■■■□□ 2.76
NPHP3-202ENST00000383282 CRACR2BQ8N4Y2 399 aaPredicted RBP32.29■■■□□ 2.76
NPHP3-202ENST00000383282 PXYLP1Q8TE99 480 aa32.29■■■□□ 2.76
NPHP3-202ENST00000383282 CCDC8Q9H0W5 538 aaPredicted RBP32.29■■■□□ 2.76
NPHP3-202ENST00000383282 FLT1P17948 1338 aa32.28■■■□□ 2.76
NPHP3-202ENST00000383282 GCLCP48506 637 aaPredicted RBP32.28■■■□□ 2.76
NPHP3-202ENST00000383282 IRF5Q13568 498 aa32.28■■■□□ 2.76
NPHP3-202ENST00000383282 RRP1BQ14684 758 aaKnown RBP32.28■■■□□ 2.76
NPHP3-202ENST00000383282 ADGRA1Q86SQ6 560 aa32.28■■■□□ 2.76
NPHP3-202ENST00000383282 FOXP4Q8IVH2 680 aaPredicted RBP32.28■■■□□ 2.76
NPHP3-202ENST00000383282 MGAMO43451 1857 aa32.27■■■□□ 2.76
NPHP3-202ENST00000383282 ASNSP08243 561 aa32.27■■■□□ 2.76
NPHP3-202ENST00000383282 SH3D19Q5HYK7 790 aa32.27■■■□□ 2.76
NPHP3-202ENST00000383282 PIH1D3Q9NQM4 214 aaKnown RBP32.27■■■□□ 2.76
NPHP3-202ENST00000383282 TLR7Q9NYK1 1049 aaKnown RBP32.27■■■□□ 2.76
NPHP3-202ENST00000383282 HLA-DOAP06340 250 aa32.26■■■□□ 2.75
NPHP3-202ENST00000383282 CYP7A1P22680 504 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 CEP85Q6P2H3 762 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 EAF2Q96CJ1 260 aaPredicted RBP32.25■■■□□ 2.75
NPHP3-202ENST00000383282 WDR18Q9BV38 432 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 UNC93B1Q9H1C4 597 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 GINM1Q9NU53 330 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 TMOD4Q9NZQ9 345 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 TAOK2Q9UL54 1235 aa32.25■■■□□ 2.75
NPHP3-202ENST00000383282 IDH1O75874 414 aaKnown RBP32.24■■■□□ 2.75
NPHP3-202ENST00000383282 INHAP05111 366 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 ELNP15502 786 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 CERS3Q8IU89 383 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 ERC1Q8IUD2 1116 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 U2AF1L4Q8WU68 220 aaKnown RBP32.24■■■□□ 2.75
NPHP3-202ENST00000383282 DPF3Q92784 378 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 HTATIP2Q9BUP3 242 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 ASCC2Q9H1I8 757 aaPredicted RBP32.24■■■□□ 2.75
NPHP3-202ENST00000383282 PALD1Q9ULE6 856 aa32.24■■■□□ 2.75
NPHP3-202ENST00000383282 METTL16Q86W50 562 aaKnown RBP32.23■■■□□ 2.75
NPHP3-202ENST00000383282 ATAD5Q96QE3 1844 aa32.22■■■□□ 2.75
NPHP3-202ENST00000383282 BACE1P56817 501 aa32.22■■■□□ 2.75
NPHP3-202ENST00000383282 IRX3P78415 501 aaPredicted RBP32.22■■■□□ 2.75
NPHP3-202ENST00000383282 MTMR2Q13614 643 aa32.22■■■□□ 2.75
NPHP3-202ENST00000383282 DNAJC18Q9H819 358 aa32.22■■■□□ 2.75
NPHP3-202ENST00000383282 LOC285556D6RIA3 1793 aa32.22■■■□□ 2.75
NPHP3-202ENST00000383282 CAPN2P17655 700 aa32.21■■■□□ 2.75
NPHP3-202ENST00000383282 DYNLL1P63167 89 aaKnown RBP32.21■■■□□ 2.75
NPHP3-202ENST00000383282 SAP30BPQ9UHR5 308 aaKnown RBP32.21■■■□□ 2.75
NPHP3-202ENST00000383282 ZBED9Q6R2W3 1325 aa32.21■■■□□ 2.75
NPHP3-202ENST00000383282 C19orf81C9J6K1 198 aa32.2■■■□□ 2.75
NPHP3-202ENST00000383282 H0YGN5 161 aa32.2■■■□□ 2.75
NPHP3-202ENST00000383282 SGPL1O95470 568 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms